PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022139846.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 292aa    MW: 32557.6 Da    PI: 8.2439
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022139846.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.29.6e-34571971128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81 
                     lp+G++F+Ptd+e++ e+L++k+ ++       ++++   ++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      + 
  XP_022139846.1  57 LPAGVKFDPTDQEIL-EHLEAKAMSDAgklhplIDEFIPtLEGEnGICYTHPQKLP-GVSKDGQIRHFFHRPSKAYTTGTRKRRKVHtdeegnET 149
                     799***********9.99**99988886775443332222443336**********.555666777******************74434555578 PP

             NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+++vl+ +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  XP_022139846.1 150 RWHKTGKTRPVLA-GGAVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 197
                     8************.9*************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MTWCSGSDDE SSAPIELPKS SIVPKPHHPQ PTALRCPSCG HQIELQDQGG IHNLPGLPAG  60
VKFDPTDQEI LEHLEAKAMS DAGKLHPLID EFIPTLEGEN GICYTHPQKL PGVSKDGQIR  120
HFFHRPSKAY TTGTRKRRKV HTDEEGNETR WHKTGKTRPV LAGGAVKGFK KILVLYTNYG  180
RQRKPEKTNW VMHQYHLGNN EEEKDGELVV SKVFFQTQPR QCSSTNNLQS EINFKNSTAG  240
PHPDSAAGLV DYYNAASNFI TFDPNLVLNG DGSSFIRFPP PDTTKRKLDT KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-121NAC family protein