PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022139827.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | Trihelix | ||||||||
Protein Properties | Length: 287aa MW: 32684.4 Da PI: 4.4028 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 32.8 | 1.8e-10 | 26 | 103 | 2 | 80 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 Wt e l+L+++ +e + ++ + ++W+ v++++ + + r+++qC+ kw+ l ++ ik++e + +++ s ++ XP_022139827.1 26 WTAAECLVLVNVIAAVEADCLKALSSYQKWKIVAENCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEM-PDDDSYWS 103 ***********************************************************99999999986.55555665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MKQEDGNRGA GVSGSRRTRS QIAPDWTAAE CLVLVNVIAA VEADCLKALS SYQKWKIVAE 60 NCTSLDVART SNQCRRKWDC LLIEHDVIKQ WELEMPDDDS YWSLESGRRK ELGLPENFDK 120 ELFKAIDNVA TMRANQSDTE PDSDPEAGVE MLDEISEPGP KRQRRRSISK RSQALEKSLE 180 CEEEDEEKPP LNSPEAEPRE CFIKSNGEKQ IDSLELEEEQ MMTKKLLENV EQIQAIVSEN 240 AEYATSDEKN TNHRIDSVRR QGNTLIRCLG DILNAINDLH GLFEDRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31270.1 | 5e-60 | Trihelix family protein |