PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022139187.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 322aa MW: 36802 Da PI: 6.9546

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022139187.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	91.9	6.7e-29	47	132	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r+++++r++++++k+plW++vs+ m +e g++rs k+Ckek++nl k+ykk+keg+++r+ + +++++f+qlea XP_022139187.1 47 RWPRQETLTLLEIRSRLDSRFKESNQKGPLWDQVSRMMaEEYGYKRSGKKCKEKFDNLYKYYKKTKEGKSGRH--DGKHYRFFRQLEA 132 8***********************************7788************************985..5557*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
DTNAIVGGGS SASAAASSAP FFRRNKALDS EWSCPYGNDV VGGANSRWPR QETLTLLEIR 60 SRLDSRFKES NQKGPLWDQV SRMMAEEYGY KRSGKKCKEK FDNLYKYYKK TKEGKSGRHD 120 GKHYRFFRQL EAIYGECSDQ LPSPGSESIF YRNSDVAGAN LSPASTTGGN IHKEASSDHH 180 MASAGVSLSF SISSDFETSS SANYHDDDLS AIAFMMNQRK VENDAPREKE RQKKGQGWRE 240 EVEKMVDSKL SILMETQENW MEKIMASVED GERERIMREE EWRKQEVARF DHEMHEFCAR 300 ERAWLEAREA TLMEIMKKFG GK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	99	KRSGKKCKE
2	226	231	PREKER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	3e-59	Trihelix family protein