PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022139055.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

NAC

Protein Properties

Length: 452aa MW: 49982 Da PI: 6.7443

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022139055.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.1	5.9e-52	32	159	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yLk+kv gk++++ ++i+evdiyk+ePwdL +++k++++e+yfFs dkky +g r nrat++gyWkatg+d++v XP_022139055.1 32 LAPGFRFHPTDEELVIYYLKRKVCGKSFRF-NAISEVDIYKSEPWDLAgkSRLKSRDQEYYFFSVLDKKYGNGARMNRATSQGYWKATGNDRPVR 125 579***********************99.89**********85348889999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vglkktLvf++grap+g++t+Wvmheyrl XP_022139055.1 126 H-DSRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRL 159 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MGSETLTLSS PPAPTKPVAA AAAAAAAAPT ALAPGFRFHP TDEELVIYYL KRKVCGKSFR 60 FNAISEVDIY KSEPWDLAGK SRLKSRDQEY YFFSVLDKKY GNGARMNRAT SQGYWKATGN 120 DRPVRHDSRT VGLKKTLVFH SGRAPDGKRT NWVMHEYRLV DEELEKAGAG TGSSQDAYVL 180 CRVFHKSNIG PPNGHRYAPF IEEEWDDAGS VLIPGEEIAD GVVASHDAQS ERNSNSVCTA 240 EGNNNGACRE GKDSMQEKTK FINKEPVISN DPPRNSHNFL FMCKSEKLED YTPPSIIANP 300 KPFPLMKYKR RRQSDLVSEL SKASENSTMS NEEPSLSETA IGSQTDGTTT SVSTPTTKNF 360 LSALVEYSLL ESTEPKDAPA PPPALETSDL SSSVHPSILK FIQDLQNEIH KTSMERETLK 420 FELLSARAMI SILQSRIVVL NKEINDLKSN HD

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MGSETLTLSS PPAPTKPVAA AAAAAAAAPT ALAPGFRFHP TDEELVIYYL KRKVCGKSFR  60
FNAISEVDIY KSEPWDLAGK SRLKSRDQEY YFFSVLDKKY GNGARMNRAT SQGYWKATGN  120
DRPVRHDSRT VGLKKTLVFH SGRAPDGKRT NWVMHEYRLV DEELEKAGAG TGSSQDAYVL  180
CRVFHKSNIG PPNGHRYAPF IEEEWDDAGS VLIPGEEIAD GVVASHDAQS ERNSNSVCTA  240
EGNNNGACRE GKDSMQEKTK FINKEPVISN DPPRNSHNFL FMCKSEKLED YTPPSIIANP  300
KPFPLMKYKR RRQSDLVSEL SKASENSTMS NEEPSLSETA IGSQTDGTTT SVSTPTTKNF  360
LSALVEYSLL ESTEPKDAPA PPPALETSDL SSSVHPSILK FIQDLQNEIH KTSMERETLK  420
FELLSARAMI SILQSRIVVL NKEINDLKSN HD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.2	1e-120	NAC family protein