PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138967.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family AP2
Protein Properties Length: 275aa    MW: 30545.8 Da    PI: 9.4736
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138967.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-17352155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_022138967.1  3 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 52
                    78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
RSSQYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA RAYDRAAIKF RGVDADINFN  60
ITDYDEDMKQ MKKLSKEEFV HVLRRQSTGF SRGGSQLRGL SLQKYGRWEA QMGQIIGKSG  120
VEQKTCKGET MVEASNGGNG HNLDLSIGGI FNYHFSNSSQ KLNIERPKNE NNCVAGGQPH  180
VPPSVWSGFY SGFSPDDEER GREKRNNGDS TKIPTSWGWQ MSMPMPMQIQ GNMSSNGIIG  240
REEAHVLPKS AASSGFSSSS NFGSLYAQNN TTNIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.23e-58AP2 family protein