PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022138601.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26498.9 Da PI: 9.3627 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.8 | 4.2e-21 | 73 | 122 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 y+G+r+++ +g+W+AeIrdp + r++lg+f taeeAa+a+++a+k+++ge XP_022138601.1 73 YRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFSTAEEAARAYDEAAKRIRGE 122 9*******.**********94....35**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MCGGAIISDF IEKKRSRKFS NGDLWSEIDP FSDLLGLDFS SVKSEKPQKR ERSPAVAAEG 60 IELKPRKTRK NLYRGIRQRP WGKWAAEIRD PQKGVRVWLG TFSTAEEAAR AYDEAAKRIR 120 GEKAKLNFAP AAQPQAPAKK RCVLPELTRE GLNTTGPPTR SRTSNSYNDG IYYGDELASG 180 FELKEQISNL TSFLGLDGED QQLSQLGGSD EFDRVVVDLW MMDDRSLNRQ QLGQLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 1e-43 | ERF family protein |