PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138229.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ERF
Protein Properties Length: 331aa    MW: 36049.6 Da    PI: 6.029
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.72.5e-1752100355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  XP_022138229.1  52 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMKG 100
                     56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MATSKASDKG YPVYETSQSQ MGFTLIQRNS SPMSQTGGER RGRRKQAEPG RFLGVRRRPW  60
GRYAAEIRDP TTKERHWLGT FDTAHEAALA YDRAALSMKG TQARTNFIYS DTSTFHSLLT  120
AFDVQTLLPS DSHSKQLQHS HISNQNITTP FAQSQPSIPQ TSSNASPDHD DTNFFFSNDS  180
NSGYLSCIVP DNCLKPPSDS TQKIQPKKSH PSTASNDPQK CCFFSPNSIE TLPSEGLDVS  240
AMAYSAGYGS VMAEPNCSND GVWDKQQVWE SNGDELSAII NGSSSSSMVA EDGALHPFLN  300
TSYAGLLPQS SACSPSVPPF GDAFDFGYPL L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.13e-66ERF family protein