PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022138146.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 295aa MW: 32833.4 Da PI: 6.1408 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.4 | 1.6e-18 | 25 | 72 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl XP_022138146.1 25 RGPWTVEEDITLINYIANHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 72 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.5 | 9.6e-16 | 78 | 121 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia+ ++ gRt++++k++w++ XP_022138146.1 78 RGNITLEEQLLILELHSRWGNR-WSKIAQQLP-GRTDNEIKNYWRT 121 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence |
MDGSKEKRFD AGSFHGGEDD GDLRRGPWTV EEDITLINYI ANHGEGRWNS LARCAGLKRT 60 GKSCRLRWLN YLRPDVRRGN ITLEEQLLIL ELHSRWGNRW SKIAQQLPGR TDNEIKNYWR 120 TRVQKHAKQL KCDVNSKQFK DTMRYLWMPR LVERIQAAAT AAASSAAAPP TIVNNNGNDF 180 VGTPQVTPSY TSENSSTGTG GGGVSSDGTQ VSSVSDLTDC YNNFRVGDCF PMGYSQEPPP 240 LQSPAGGFFN QGMLDFQAME QSSSQWLPDG GVDMSESLWN GAGADDLWFL QQQLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 4e-86 | MYB family protein |