PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022138101.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family HSF
Protein Properties Length: 332aa    MW: 38739.9 Da    PI: 5.4248
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022138101.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1162.3e-36411322102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+yei+ed+++++++sws+ +nsfvv+d+++f+ ++LpkyFkhsnf+SFvRQLn+YgF+kv+ ++         weF+h+ F +g+k+ll+ 
  XP_022138101.1  41 FLTKTYEIIEDSATNDIVSWSRGNNSFVVWDPQSFSLTLLPKYFKHSNFSSFVRQLNTYGFRKVDPDK---------WEFAHEGFLRGQKHLLKL 126
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k+
  XP_022138101.1 127 IRRRKT 132
                     ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MNNRPRRVKE EFPAASSSSL SGDPPPPRPL EGLHETGPPP FLTKTYEIIE DSATNDIVSW  60
SRGNNSFVVW DPQSFSLTLL PKYFKHSNFS SFVRQLNTYG FRKVDPDKWE FAHEGFLRGQ  120
KHLLKLIRRR KTPQSNASQQ ASDPCVEVGW FGLDGEVDRL RRDKQVLMAE LVKLRQQQQS  180
TKTYLQTMEN RLKKTETKQQ LMMNFLARAI QNPDFIQHLI HHKHSHRELH EAINRKRRRH  240
IDQGPFPEDD IHVDVDLLDL QIQHQPQDEA EKGDDVDECV ESDRLDDGFW ENLLNEANEE  300
GFGFEDQQDD NYKEDDNGDD FVHQFGFFNS TP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1235239RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-111HSF family protein