PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137842.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

SBP

Protein Properties

Length: 954aa MW: 105160 Da PI: 8.6601

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.8	9.7e-41	32	109	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls+ak+yhrrhkvCevhsk++++lv++l+qrfCqqCsrfh lsefD++krsCrrrLa+hn rrrk+q+ XP_022137842.1 32 MCQVDNCKEDLSTAKDYHRRHKVCEVHSKSSKALVAKLMQRFCQQCSRFHPLSEFDDGKRSCRRRLAGHNWRRRKTQP 109 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 954 aa Download sequence
VEEPVSKPPK KVRPGSPGAG TGTATGTPTY PMCQVDNCKE DLSTAKDYHR RHKVCEVHSK 60 SSKALVAKLM QRFCQQCSRF HPLSEFDDGK RSCRRRLAGH NWRRRKTQPE DVSSRLTRPG 120 SRGPPSSGNL DIVSLLTLLA RAQGKNEDQS VKSLLSSNSD QLIQILNKIN SLPLPADLAA 180 KLPNLENFRG KAAPQSSFQH QNKLNGNASS PSTMDLLTVL SATLAASAPD ALAMLSQKSS 240 LSSDSEKTRS SCPSGSDLQN RPLELPSVGG GGERSSTSYQ SPMEDSDGQV QGTRVGLPLQ 300 LFSSSPEHDA PPNLAASRKY FSSDSSNPIE ERSPSSSPPL LQKLFPVQSI EETTNNGKIP 360 FRKEVSGIVE VRKPPSSNIP FELFRESDRG ADRDLFRTLP YQAGYTSSGS DHSPSSLNSD 420 AQDRTGRISF KLFDKDPSQF PGTLRTQIFN WLSNCPSEME SYIRPGCVVL SIYMSMSSIA 480 WEQLEENLVL HVKSLVHSEE LDFWRSGRFL VYTGRQLASH KDGKIRPYKS LKAWSNPELI 540 SVSPLAVVGG QKTSFLLRGR NLKTPGTKIH FTSMGGYISE EVMGLSRQGV IYDEIHSGSF 600 KIGDASPTTL GRCFIEVENG FRGNSFPIII ADAAICKELR HLESEFDEFK VPDISSESHS 660 YVPAQPRLKD ENLQFLNELG WLFQRERFSS ELDNPDILIR RFKLLLAFSA ERDFCALVKT 720 LLDILVKKCL ITDGLPMKSL EMISEIQLLN RAVKRRCRRM VDLLVHYCVS GIGDTEKKYL 780 FPPNFIGPGG VTPLHLAASM TDADDMVDAL TNDPLEIGLK CWSSQLDASG QSARAYALMR 840 GNNSCDELVN RKLGDRKNGQ VSVRIGNEIE QLQVSSGEGG RVQARSCSRC AIVAAKCNRR 900 VPGSGTHRML HRPYIHSMLA IAAVCVCVCL FLRGSPDIGL VAPFKWENLG YGTI

Sequence ? help Back to Top

Protein Sequence Length: 954 aa Download sequence

VEEPVSKPPK KVRPGSPGAG TGTATGTPTY PMCQVDNCKE DLSTAKDYHR RHKVCEVHSK  60
SSKALVAKLM QRFCQQCSRF HPLSEFDDGK RSCRRRLAGH NWRRRKTQPE DVSSRLTRPG  120
SRGPPSSGNL DIVSLLTLLA RAQGKNEDQS VKSLLSSNSD QLIQILNKIN SLPLPADLAA  180
KLPNLENFRG KAAPQSSFQH QNKLNGNASS PSTMDLLTVL SATLAASAPD ALAMLSQKSS  240
LSSDSEKTRS SCPSGSDLQN RPLELPSVGG GGERSSTSYQ SPMEDSDGQV QGTRVGLPLQ  300
LFSSSPEHDA PPNLAASRKY FSSDSSNPIE ERSPSSSPPL LQKLFPVQSI EETTNNGKIP  360
FRKEVSGIVE VRKPPSSNIP FELFRESDRG ADRDLFRTLP YQAGYTSSGS DHSPSSLNSD  420
AQDRTGRISF KLFDKDPSQF PGTLRTQIFN WLSNCPSEME SYIRPGCVVL SIYMSMSSIA  480
WEQLEENLVL HVKSLVHSEE LDFWRSGRFL VYTGRQLASH KDGKIRPYKS LKAWSNPELI  540
SVSPLAVVGG QKTSFLLRGR NLKTPGTKIH FTSMGGYISE EVMGLSRQGV IYDEIHSGSF  600
KIGDASPTTL GRCFIEVENG FRGNSFPIII ADAAICKELR HLESEFDEFK VPDISSESHS  660
YVPAQPRLKD ENLQFLNELG WLFQRERFSS ELDNPDILIR RFKLLLAFSA ERDFCALVKT  720
LLDILVKKCL ITDGLPMKSL EMISEIQLLN RAVKRRCRRM VDLLVHYCVS GIGDTEKKYL  780
FPPNFIGPGG VTPLHLAASM TDADDMVDAL TNDPLEIGLK CWSSQLDASG QSARAYALMR  840
GNNSCDELVN RKLGDRKNGQ VSVRIGNEIE QLQVSSGEGG RVQARSCSRC AIVAAKCNRR  900
VPGSGTHRML HRPYIHSMLA IAAVCVCVCL FLRGSPDIGL VAPFKWENLG YGTI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	751	756	RAVKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76580.1	0.0	SBP family protein