PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137835.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CAMTA

Protein Properties

Length: 960aa MW: 107787 Da PI: 7.8508

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.7	6.1e-55	19	136	2	118
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 ++e ++rwl++ ei++iL n++k++l+ +++ rp+ gsl+L++rk +ryfrkDG+ w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n++fq XP_022137835.1 19 VQEaQNRWLRPAEICEILRNYRKFHLAPDPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNENFQ 113 55669**************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rr+yw+L+ +le+ivlvhy+evk XP_022137835.1 114 RRSYWMLDGQLEHIVLVHYREVK 136 ******************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 960 aa Download sequence
MAESRKFIPT HHLDLGRIVQ EAQNRWLRPA EICEILRNYR KFHLAPDPPV RPPAGSLFLF 60 DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNE NFQRRSYWML 120 DGQLEHIVLV HYREVKEGYK SGISRVSVDP GSQAGGHQGG TTPVFLQANS PVGSAHTSCP 180 LILRQIVRSE NGGVDSSIRH DSVVSSDVNH VLKSSMSPVY LPAGSSVLSE QEFVIIQSGT 240 TDSITHELTD ARLAFCGLEK DMVNSEDGLI ADADIPAAKA VTQRTVQVVD NSCVKVEKTL 300 KDNLNHEGFG ELKKLDSFSR WMDKEIGGDC NDSLMTLDSG NYWCTLNAGN NEKEVSSFSH 360 HMQLDVDSLG PSLSQEQLFS IIEYSPDWTY RGNVTKVLIV GSFLGSKKLS SENQWGCMFG 420 EVEVPAEVLT NNVLRCQAPP LHAPGRIPFY VTCCNRLACS EVREFEYREK PPNLSVPDAI 480 TASAPEDEIR LQMRLISLLN LGVEEKWLNC SIQKCEKCQI RSLINSERSN SAKWRMMKGI 540 STALKSEQMT PRDLMIQTLL EDKLCEWLVC KVHEGTRGTH VLDDEGQGVI HLAAALGYEW 600 AIGPLVASGI SPNFRDSNGR TALHWASYFG REDTVTTLIR FGAAPGAVDD PTSGFPEGQK 660 AADLASSRGH KGISGYLAEA DLAEHLRTLT NGENHVDNVE ENVNFDEAIQ TADVVSSQMA 720 EDELLSLKSS LAAVRKSVRA AALIHAAFRA RSFRHKQLME SDKEMIPEDS LDLVALGILN 780 KAQKIHYEDY LHVAAVRIQQ NYRGWKGRKE FLKIRNRIVK IQAHVRGYQV RKQYRKVIWS 840 VSIVEKAILR WRRKRVGLRG FKAEGATGTV VTPHPQVEKS DEYEFLRIGR KLKYAGVEKA 900 LSRVKSMARF PEARHQYMRL VAKFDNFKIN EEETSASNQG ESSQDTHKER HLPQFSAADQ

Sequence ? help Back to Top

Protein Sequence Length: 960 aa Download sequence

MAESRKFIPT HHLDLGRIVQ EAQNRWLRPA EICEILRNYR KFHLAPDPPV RPPAGSLFLF  60
DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNE NFQRRSYWML  120
DGQLEHIVLV HYREVKEGYK SGISRVSVDP GSQAGGHQGG TTPVFLQANS PVGSAHTSCP  180
LILRQIVRSE NGGVDSSIRH DSVVSSDVNH VLKSSMSPVY LPAGSSVLSE QEFVIIQSGT  240
TDSITHELTD ARLAFCGLEK DMVNSEDGLI ADADIPAAKA VTQRTVQVVD NSCVKVEKTL  300
KDNLNHEGFG ELKKLDSFSR WMDKEIGGDC NDSLMTLDSG NYWCTLNAGN NEKEVSSFSH  360
HMQLDVDSLG PSLSQEQLFS IIEYSPDWTY RGNVTKVLIV GSFLGSKKLS SENQWGCMFG  420
EVEVPAEVLT NNVLRCQAPP LHAPGRIPFY VTCCNRLACS EVREFEYREK PPNLSVPDAI  480
TASAPEDEIR LQMRLISLLN LGVEEKWLNC SIQKCEKCQI RSLINSERSN SAKWRMMKGI  540
STALKSEQMT PRDLMIQTLL EDKLCEWLVC KVHEGTRGTH VLDDEGQGVI HLAAALGYEW  600
AIGPLVASGI SPNFRDSNGR TALHWASYFG REDTVTTLIR FGAAPGAVDD PTSGFPEGQK  660
AADLASSRGH KGISGYLAEA DLAEHLRTLT NGENHVDNVE ENVNFDEAIQ TADVVSSQMA  720
EDELLSLKSS LAAVRKSVRA AALIHAAFRA RSFRHKQLME SDKEMIPEDS LDLVALGILN  780
KAQKIHYEDY LHVAAVRIQQ NYRGWKGRKE FLKIRNRIVK IQAHVRGYQV RKQYRKVIWS  840
VSIVEKAILR WRRKRVGLRG FKAEGATGTV VTPHPQVEKS DEYEFLRIGR KLKYAGVEKA  900
LSRVKSMARF PEARHQYMRL VAKFDNFKIN EEETSASNQG ESSQDTHKER HLPQFSAADQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.3	0.0	CAMTA family protein