PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022137567.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 254aa MW: 28937.6 Da PI: 8.229 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.8 | 9.4e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELS+LCdaeva+iifs++gkl+e+ss XP_022137567.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 96.3 | 4.6e-32 | 83 | 174 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +++ ++ e+ +Lk+ +e Lq++qR+llGedL++L+ keL+qLe+qLe+sl++iRs+K+++l++q+ +lq+ke++l e+n+ Lrkk+ee XP_022137567.1 83 QVNENRSYNFDEYLNLKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKTKYLIDQLADLQHKEQMLVEDNQGLRKKVEE 174 45666778889******************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSILCD AEVALIIFSN RGKLFEFSSS 60 SSMTKTLEKY RRCNYGVWEA TRQVNENRSY NFDEYLNLKA TVEFLQQSQR NLLGEDLGPL 120 NPKELEQLEH QLETSLERIR STKTKYLIDQ LADLQHKEQM LVEDNQGLRK KVEERSAQVA 180 AAAAATWDWE AGGGGHSMEH HSRGASQTDA FFHPIIQSTP TLQIGYNPVH SVGLNNNVGP 240 PSQNANGFQL DWML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15800.1 | 2e-88 | MIKC_MADS family protein |