PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022137566.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 262aa    MW: 29854.7 Da    PI: 8.6509
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022137566.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.79.9e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtf+kRrng+lKKA+ELS+LCdaeva+iifs++gkl+e+ss
  XP_022137566.1  9 KRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSNRGKLFEFSS 59
                    79***********************************************96 PP

2K-box96.25e-32831749100
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     + +++ ++   e+ +Lk+ +e Lq++qR+llGedL++L+ keL+qLe+qLe+sl++iRs+K+++l++q+ +lq+ke++l e+n+ Lrkk+ee
  XP_022137566.1  83 QVNENRSYNFDEYLNLKATVEFLQQSQRNLLGEDLGPLNPKELEQLEHQLETSLERIRSTKTKYLIDQLADLQHKEQMLVEDNQGLRKKVEE 174
                     45666778889******************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSILCD AEVALIIFSN RGKLFEFSSS  60
SSMTKTLEKY RRCNYGVWEA TRQVNENRSY NFDEYLNLKA TVEFLQQSQR NLLGEDLGPL  120
NPKELEQLEH QLETSLERIR STKTKYLIDQ LADLQHKEQM LVEDNQGLRK KVEERSAQVA  180
AAAAATWDWE AGGGGHSMEH HSRGASQTDA FFHPIIQSTP TLQIGSISLV NFRYNPVHSV  240
GLNNNVGPPS QNANGFQLDW ML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15800.24e-86MIKC_MADS family protein