PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022137440.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 203aa MW: 23274.8 Da PI: 10.6473 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.8 | 2.9e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+++fs++gk y +ss XP_022137440.1 9 KRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 77.3 | 4e-26 | 82 | 169 | 11 | 98 |
K-box 11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ ++ e++ +++ i++L++ +Rh+ GedL++Ls+k+L+qLe+qL +++++RskK +++ e+i+ l++k k++qee+ +L+k+l XP_022137440.1 82 HSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVKDLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRL 169 556778*******************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MGRGKVELKR IENPTSRQVT FSKRRNGLLK KAYELSVLCD AEVALLVFSP SGKAYQFSSH 60 DMDGTLARYR SDMGLPQSNH PHSRVMFWKS EMEEMRRSIS SLESRLRHFA GEDLGPLSVK 120 DLKQLERQLS VGIERVRSKK RRIISEHINM LKRKYKSVQE EHSRLQKRLN QLKDVDVTAS 180 RTSLDANASS ALEMAFQVDG VLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26310.1 | 1e-45 | MIKC_MADS family protein |