PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022137440.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MIKC_MADS
Protein Properties Length: 203aa    MW: 23274.8 Da    PI: 10.6473
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022137440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.82.9e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien + rqvtfskRrng+lKKA+ELSvLCdaeva+++fs++gk y +ss
  XP_022137440.1  9 KRIENPTSRQVTFSKRRNGLLKKAYELSVLCDAEVALLVFSPSGKAYQFSS 59
                    79***********************************************96 PP

2K-box77.34e-26821691198
           K-box  11 eakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     ++    ++ e++ +++ i++L++ +Rh+ GedL++Ls+k+L+qLe+qL  +++++RskK +++ e+i+ l++k k++qee+ +L+k+l
  XP_022137440.1  82 HSRVMFWKSEMEEMRRSISSLESRLRHFAGEDLGPLSVKDLKQLERQLSVGIERVRSKKRRIISEHINMLKRKYKSVQEEHSRLQKRL 169
                     556778*******************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MGRGKVELKR IENPTSRQVT FSKRRNGLLK KAYELSVLCD AEVALLVFSP SGKAYQFSSH  60
DMDGTLARYR SDMGLPQSNH PHSRVMFWKS EMEEMRRSIS SLESRLRHFA GEDLGPLSVK  120
DLKQLERQLS VGIERVRSKK RRIISEHINM LKRKYKSVQE EHSRLQKRLN QLKDVDVTAS  180
RTSLDANASS ALEMAFQVDG VLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26310.11e-45MIKC_MADS family protein