PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137322.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 560aa MW: 61769.7 Da PI: 8.9696

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137322.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	53	6.2e-17	262	311	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f +Lre++P + ++K +Ka+ L +++eYI+ Lq XP_022137322.1 262 RSKHSATEQRRRSKINDRFLKLREIIPRS----DQKRDKASFLLEVIEYIQFLQ 311 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MELPQPPRPL GNEGRKPTHD FLSSLYSHST VQQDPCHSFQ GGYIKTHDFL RPLERIGKTC 60 AKEETTVNVS APPLAAPPAQ NSRLLPGGIG SYSISHISYF NQRAPKPEGS VFSVAQPSNT 120 DKSDDDSRCS SLSGSGFTLW EESAVKKGKT MNENLGEKPG LRESTAKIEQ WAVSTERPSQ 180 SSSSNHRNSF SSLSSSQPSG QRNRSFDEML KSAVKVSSEE EELDDGKVFV IKKESSPSTA 240 YEGELRINVG GKCSDQKANT PRSKHSATEQ RRRSKINDRF LKLREIIPRS DQKRDKASFL 300 LEVIEYIQFL QEKVRKYESS HQGWYPEPTK LIPSRNNCNP AQCYIDQSQI AKSSPVFIFA 360 AKSDEKNNPH SSAFPRYSLY PVESEISTAT TFRGTDHHPG TTNKATPYPM SQPRHFTPVV 420 GEGAKTKFHS QLAYDSDNKP CEAQPASCEM RSCSNDVAAV GNKLKKPEQS VEGGRISISS 480 AYSQGLLNIL TQALQSSGVD MSQASISVQI ELGKRTNYRE TVPTSAIVDD SVRPSDGGTI 540 RTRVAATEHL EQALSKKQKT

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MELPQPPRPL GNEGRKPTHD FLSSLYSHST VQQDPCHSFQ GGYIKTHDFL RPLERIGKTC  60
AKEETTVNVS APPLAAPPAQ NSRLLPGGIG SYSISHISYF NQRAPKPEGS VFSVAQPSNT  120
DKSDDDSRCS SLSGSGFTLW EESAVKKGKT MNENLGEKPG LRESTAKIEQ WAVSTERPSQ  180
SSSSNHRNSF SSLSSSQPSG QRNRSFDEML KSAVKVSSEE EELDDGKVFV IKKESSPSTA  240
YEGELRINVG GKCSDQKANT PRSKHSATEQ RRRSKINDRF LKLREIIPRS DQKRDKASFL  300
LEVIEYIQFL QEKVRKYESS HQGWYPEPTK LIPSRNNCNP AQCYIDQSQI AKSSPVFIFA  360
AKSDEKNNPH SSAFPRYSLY PVESEISTAT TFRGTDHHPG TTNKATPYPM SQPRHFTPVV  420
GEGAKTKFHS QLAYDSDNKP CEAQPASCEM RSCSNDVAAV GNKLKKPEQS VEGGRISISS  480
AYSQGLLNIL TQALQSSGVD MSQASISVQI ELGKRTNYRE TVPTSAIVDD SVRPSDGGTI  540
RTRVAATEHL EQALSKKQKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	7e-89	bHLH family protein