PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137267.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 346aa MW: 38639.2 Da PI: 5.7381

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137267.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++++G g+W+++++ g+ R++k+c++rw +yl XP_022137267.1 14 KGLWSPEEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	45.9	1.3e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_022137267.1 67 RGMFSQQEEDLIISLHEVLGNR-WAQIAAQLP-GRTDNEIKNFWNS 110 788*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGRHSCCLKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT DNEIKNFWNS SLKKKLMKQG 120 IDPNTHKPII NIQEIKEKKI FEDKEFGGIQ IQIPAGPGVS GGLSSQGPAF LVGGGGEYYD 180 GGMTAAPIRD HFMININKQA LDSLSYLEFQ TGLDLDSCVN FETQYQESNF GFSSVPSLTN 240 SEEFSDNSGS NMSNNYGGFY MSNNNGVENS TFCSWENENK IDSFFQIHGN NNNGIKSEEL 300 KRGTGSSVMQ DGQLIQSRSS VDFCSYPLTS LSQEISGGNF DAFNNL

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGRHSCCLKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SQQEEDLIIS LHEVLGNRWA QIAAQLPGRT DNEIKNFWNS SLKKKLMKQG  120
IDPNTHKPII NIQEIKEKKI FEDKEFGGIQ IQIPAGPGVS GGLSSQGPAF LVGGGGEYYD  180
GGMTAAPIRD HFMININKQA LDSLSYLEFQ TGLDLDSCVN FETQYQESNF GFSSVPSLTN  240
SEEFSDNSGS NMSNNYGGFY MSNNNGVENS TFCSWENENK IDSFFQIHGN NNNGIKSEEL  300
KRGTGSSVMQ DGQLIQSRSS VDFCSYPLTS LSQEISGGNF DAFNNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	1e-78	MYB family protein