PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022137212.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 542aa MW: 59134 Da PI: 5.3623 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 35.8 | 1.4e-11 | 358 | 400 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_022137212.1 358 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 400 79*********************66......****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 542 aa Download sequence |
MLSRVGNVVW MENREDEDSN SWTKTNNATT NGENPLNPGN CVLMENKDEM SSLSTFKSML 60 EVEDDWCITG NSLHNHGDIN DITFSDNLLL PTGDSSSSCS PSSSVFNNID PSQLRFFLPP 120 NRALSSLHKV ISNNPLEHGF DLGAEVGFLD VQASNASALL NNGGGLLTGF TDLSPTSHMN 180 TPNLCLGSQL TAPNVPQLSE NCSGLAGFQS FDENLGNALL LNRSKLLRPL ESFPSVGAQP 240 TLFQKRAALR KNLADNGSNL GVLSPDGGWF SNRIEGKNEV GDENGKKRKM IYADDLQDTS 300 IDTSHFNYDS DDFTENNNNT KLDENGRNAG NTSNANSTVT GGGDQKGKKK GLPAKNLMAE 360 RRRRKKLNDR LYMLRSVVPK ISKMDRASIL GDAIEYLKEL LQRINDLHNE LEFTPSGTAL 420 TPSTSFHPLT PTPPSLSSRI KEELCPSSFP SPSGQPARVE VRVREGRAVN IHMFCSRRPG 480 LLLSTVRALD NLGLDIQQAV ISCFNGFAMD IFRAEQCSEG QDVHPQQIKA ILLDSVGFNG 540 AT |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 348 | 366 | KKKGLPAKNLMAERRRRKK |
2 | 360 | 367 | ERRRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G26744.1 | 1e-100 | bHLH family protein |