PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137211.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 542aa MW: 59134 Da PI: 5.3623

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137211.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.4e-11	358	400	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_022137211.1 358 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 400 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MLSRVGNVVW MENREDEDSN SWTKTNNATT NGENPLNPGN CVLMENKDEM SSLSTFKSML 60 EVEDDWCITG NSLHNHGDIN DITFSDNLLL PTGDSSSSCS PSSSVFNNID PSQLRFFLPP 120 NRALSSLHKV ISNNPLEHGF DLGAEVGFLD VQASNASALL NNGGGLLTGF TDLSPTSHMN 180 TPNLCLGSQL TAPNVPQLSE NCSGLAGFQS FDENLGNALL LNRSKLLRPL ESFPSVGAQP 240 TLFQKRAALR KNLADNGSNL GVLSPDGGWF SNRIEGKNEV GDENGKKRKM IYADDLQDTS 300 IDTSHFNYDS DDFTENNNNT KLDENGRNAG NTSNANSTVT GGGDQKGKKK GLPAKNLMAE 360 RRRRKKLNDR LYMLRSVVPK ISKMDRASIL GDAIEYLKEL LQRINDLHNE LEFTPSGTAL 420 TPSTSFHPLT PTPPSLSSRI KEELCPSSFP SPSGQPARVE VRVREGRAVN IHMFCSRRPG 480 LLLSTVRALD NLGLDIQQAV ISCFNGFAMD IFRAEQCSEG QDVHPQQIKA ILLDSVGFNG 540 AT

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MLSRVGNVVW MENREDEDSN SWTKTNNATT NGENPLNPGN CVLMENKDEM SSLSTFKSML  60
EVEDDWCITG NSLHNHGDIN DITFSDNLLL PTGDSSSSCS PSSSVFNNID PSQLRFFLPP  120
NRALSSLHKV ISNNPLEHGF DLGAEVGFLD VQASNASALL NNGGGLLTGF TDLSPTSHMN  180
TPNLCLGSQL TAPNVPQLSE NCSGLAGFQS FDENLGNALL LNRSKLLRPL ESFPSVGAQP  240
TLFQKRAALR KNLADNGSNL GVLSPDGGWF SNRIEGKNEV GDENGKKRKM IYADDLQDTS  300
IDTSHFNYDS DDFTENNNNT KLDENGRNAG NTSNANSTVT GGGDQKGKKK GLPAKNLMAE  360
RRRRKKLNDR LYMLRSVVPK ISKMDRASIL GDAIEYLKEL LQRINDLHNE LEFTPSGTAL  420
TPSTSFHPLT PTPPSLSSRI KEELCPSSFP SPSGQPARVE VRVREGRAVN IHMFCSRRPG  480
LLLSTVRALD NLGLDIQQAV ISCFNGFAMD IFRAEQCSEG QDVHPQQIKA ILLDSVGFNG  540
AT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	348	366	KKKGLPAKNLMAERRRRKK
2	360	367	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-100	bHLH family protein