PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137139.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

SBP

Protein Properties

Length: 545aa MW: 60165.9 Da PI: 7.6047

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.4	7.6e-42	176	252	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqv gC++dls+ k+yh+rhkvC+vhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_022137139.1 176 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQV 252 **************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MESWNYGSQG KGFLSDEINS TTNSPLRSKY SLLGWEFKNP CNFGDNMLLS GAQHVENQSF 60 GELEFPQMVG KQLPDDSVSD VLNTKIGGGR NLNLVLPTSH PLLGEEESTS KLSGSIVDSN 120 NRDSSFIDLK LGRFIDQGDA HSSKYTKRAA ISSSTESSTS QKKMRSQGVN FQTAFCQVYG 180 CNKDLSSSKD YHKRHKVCDV HSKTAKVIVN GIEQRFCQQC SRFHLLAEFD DGKRSCRKRL 240 AGHNERRRKP QVSFHSGRAQ RLLQPYNGIG DSRFQDKTFT ATSFICKDIL SSGLYYPEKF 300 GTNDWSKRVK VEGKNDYNSM SATSLNNRHL NMKSPLLPYD FEVQIPPFQD NGTSTAPTGN 360 MSSETTCQYS QNVGGPHIDT HPLFHHTTLA SEDFGVYDAA STIQGLSGIP DSGCALSLLS 420 SQSQSASSHP SIVHMPRAFI MSESQSNYSM SELSEKLMGV SSQASSTGIS SKFASGMSEA 480 QVGPILTCES SDRTVTFQIP DGVLHRSDLP KANLSYERTP TIDLLQLSSQ LQRVEHQRHS 540 MQDSA

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MESWNYGSQG KGFLSDEINS TTNSPLRSKY SLLGWEFKNP CNFGDNMLLS GAQHVENQSF  60
GELEFPQMVG KQLPDDSVSD VLNTKIGGGR NLNLVLPTSH PLLGEEESTS KLSGSIVDSN  120
NRDSSFIDLK LGRFIDQGDA HSSKYTKRAA ISSSTESSTS QKKMRSQGVN FQTAFCQVYG  180
CNKDLSSSKD YHKRHKVCDV HSKTAKVIVN GIEQRFCQQC SRFHLLAEFD DGKRSCRKRL  240
AGHNERRRKP QVSFHSGRAQ RLLQPYNGIG DSRFQDKTFT ATSFICKDIL SSGLYYPEKF  300
GTNDWSKRVK VEGKNDYNSM SATSLNNRHL NMKSPLLPYD FEVQIPPFQD NGTSTAPTGN  360
MSSETTCQYS QNVGGPHIDT HPLFHHTTLA SEDFGVYDAA STIQGLSGIP DSGCALSLLS  420
SQSQSASSHP SIVHMPRAFI MSESQSNYSM SELSEKLMGV SSQASSTGIS SKFASGMSEA  480
QVGPILTCES SDRTVTFQIP DGVLHRSDLP KANLSYERTP TIDLLQLSSQ LQRVEHQRHS  540
MQDSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	3e-49	SBP family protein