PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022137050.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Dof

Protein Properties

Length: 416aa MW: 45483.3 Da PI: 8.4752

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022137050.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.5	1.6e-39	81	141	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrk+k+s XP_022137050.1 81 PDKLLPCPRCKSMETKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKSSA 141 57889****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MLDSKDPAIK LFGRKIPLSD DGESPAIHPQ QSPSDKDESQ PPKDATVDDP KTPSIDEETE 60 KPINGKTBSE TPNSEKTLKX PDKLLPCPRC KSMETKFCYY NNYNVNQPRH FCKACQRYWT 120 AGGTMRNVPV GAGRRKSKSS ASYYRQITIS EALEGARLEA PNGTHKPKFI SNNNGRVLSF 180 NLDAPNSDPV VASVLNLSEN RVLSNGLKKF EDKGSDGCEK ISSVCSMGVQ SSSEVGLEGR 240 QRTQEPPING FPSHVSCLPW PFVWNSSVPP PAFCXQGGFP LPFYPAAAWN CGPGPWNTPW 300 FSPQANXSXE KPLCSDSKSS PKLGKHLREE EAVKHRNGSV LTPKTLRIDD PSEAAKSSIW 360 ATLGIKNESA ITGGKNLFKT FQPKGHEKVH XVAEASSVLQ ANPAALSRSL VFHESS

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MLDSKDPAIK LFGRKIPLSD DGESPAIHPQ QSPSDKDESQ PPKDATVDDP KTPSIDEETE  60
KPINGKTBSE TPNSEKTLKX PDKLLPCPRC KSMETKFCYY NNYNVNQPRH FCKACQRYWT  120
AGGTMRNVPV GAGRRKSKSS ASYYRQITIS EALEGARLEA PNGTHKPKFI SNNNGRVLSF  180
NLDAPNSDPV VASVLNLSEN RVLSNGLKKF EDKGSDGCEK ISSVCSMGVQ SSSEVGLEGR  240
QRTQEPPING FPSHVSCLPW PFVWNSSVPP PAFCXQGGFP LPFYPAAAWN CGPGPWNTPW  300
FSPQANXSXE KPLCSDSKSS PKLGKHLREE EAVKHRNGSV LTPKTLRIDD PSEAAKSSIW  360
ATLGIKNESA ITGGKNLFKT FQPKGHEKVH XVAEASSVLQ ANPAALSRSL VFHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-85	Dof family protein