PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136720.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family AP2
Protein Properties Length: 322aa    MW: 35310.6 Da    PI: 9.196
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136720.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.52.2e-1544103155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  XP_022136720.1  44 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEEKAARAYDLAALKYWG 103
                     57*******************666664478446*************************98 PP
2AP251.13.4e-16146197155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  XP_022136720.1 146 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 197
                     57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
NCPTGALSLA VAQTSDTAAA SAALVAVDSD SSKKIADTFG QRTSIYRGVT RHRWTGRYEA  60
HLWDNSCRRE GQARKGRQVY LGGYDKEEKA ARAYDLAALK YWGPTATTNF PVSNYTKELE  120
EMKHVTKQEF IASLRRKSSG FSRGASIYRG VTRHHQQGRW QARIGRVAGN KDLYLGTFAT  180
EEEAAEAYDI AAIKFRGLNA VTNFEMSRYD VEAIAKSALP IGGAAKRLKL CLESDQKPLP  240
NHDQAAQCSS GSNSISFGAN VQAVPPIPCG IPYDTAAMLY HHNYFHHLQP NAISESTSAA  300
LAAPVTMAPQ AAEFFVWPHQ SY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10510.11e-138AP2 family protein