PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136698.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family GATA
Protein Properties Length: 305aa    MW: 32824.5 Da    PI: 4.7655
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136698.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.55.9e-16224259134
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg
  XP_022136698.1 224 CTHCGISSksTPMMRRGPAGPRTLCNACGLKWANKG 259
                     *****99999**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MPESNFQDAM YGSGAMNNGG RDLDNIQNRV GDEEDDVTGG EESIDNPQMR FEDSGGISGS  60
VSVMNRVQDI VPATYVSGSD YNPLTGNGAD QLTLSFRGEV YAFDSVSPDK VQAVLLLLGG  120
YEIPSGIPAV GNVPINQQGT DGLPIRSVQP QRAASLSRFR EKRKERCFEK KIRYNVRKEV  180
ALRMQRKKGQ FISSKAISDG VGSSSVLAQT LDSGQDDGML ETSCTHCGIS SKSTPMMRRG  240
PAGPRTLCNA CGLKWANKGI LRDLSKVSNV GIQEPFVKET EQSDGEANES DTGINVDILS  300
SNGDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.26e-63GATA family protein