PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022136666.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 336aa MW: 37502.8 Da PI: 4.8539 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.9 | 5.3e-28 | 10 | 59 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtfskRrng++KKA+ELS+LCd+++a+i+fs++g+l +s XP_022136666.1 10 KRIENNTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFS 59 79********************************************9997 PP | |||||||
2 | K-box | 16.4 | 3.9e-07 | 111 | 180 | 8 | 77 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqi 77 ++++ e+lqqe+ ++ e++ ++++R + + L+ s e+++ e++L + l +i ++K++ll +++ XP_022136666.1 111 TSSNSNVEELQQEIGTMRHELQLAEQQLRLFEPDPLSFASNGEIESCEKNLLDTLARITQRKKDLLSSHL 180 368899***********************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MMGRVKLQIK RIENNTNRQV TFSKRRNGLI KKAYELSILC DIDIALIMFS PSGRLSHFSG 60 RRRIEDVLAR FINLPDHERG GSVVHNKEFL LGTLNNLKTE NDIALQLANP TSSNSNVEEL 120 QQEIGTMRHE LQLAEQQLRL FEPDPLSFAS NGEIESCEKN LLDTLARITQ RKKDLLSSHL 180 SPYDPPNHIQ MYLDSQEGIP TSFENDVANW LPENGQSSTQ LCGPSESSSI PQSGQYPTTV 240 YDQVSQASNM CNMGGCDMGN PNEDAYSSWH HSYTTSQLLS SFIPQTSFDD SIKHEIGGGC 300 MMSQQQVDTI SNGNQMPPSD GSTNYDATKI PQLNVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22130.1 | 2e-91 | MIKC_MADS family protein |