PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136634.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CAMTA

Protein Properties

Length: 1130aa MW: 127322 Da PI: 6.5741

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.2	9e-55	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ ++rwl++ ei++iL+n+ek+++++e+++ p+sgsl+Ly+rk++ryfrkDG++w+kkkdgk+v+E+he+LK g+v +l+cyYah+een++fqr XP_022136634.1 20 LEAQHRWLRPAEICEILNNYEKFSIASEPANMPPSGSLFLYDRKVLRYFRKDGHNWRKKKDGKAVKEAHERLKAGSVYALHCYYAHGEENENFQR 114 5679***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+ywlLee+l++ivlvhy+ev+ XP_022136634.1 115 RTYWLLEEDLSHIVLVHYREVQ 136 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1130 aa Download sequence
MAENRCCIPA NPIGIEQILL EAQHRWLRPA EICEILNNYE KFSIASEPAN MPPSGSLFLY 60 DRKVLRYFRK DGHNWRKKKD GKAVKEAHER LKAGSVYALH CYYAHGEENE NFQRRTYWLL 120 EEDLSHIVLV HYREVQSSRA NLNRNRGTHE AVLVSREFEE TTSHSEMDAS NSSSFHPSNY 180 QIPSQTTEIS LNSAQVSEYE DVESGACIVY ELQINHSSEL KSFPGYFCHF FNNVLLIDIL 240 SFAEYSSQAS TVFHSFLGLQ RPRMERFGAD LCDPNYPISL SVFSGNGFPT TSDRSKDNNS 300 AGLNCVPQKN LNFSSENVLE SGSTGIYSSN LEPSLSASQP EISGDVPKQG DEVLRMLFTE 360 KCKRKEFNNH LHSQEDCQTS QRNSSPLVRW PIDQQTLQAD LVCNVASKFH QLDHVNVVNS 420 MQSSQMNTGP QNDQSMQEHL QQMLPNTKHE YYLNSISDGK VILEGKANFP KKQPLLDAIT 480 SEGLKKSDSF NQWMNRELGD VNEASMQSNS GAYWNSVENE VGHSSISSQV HPDAYMFSPS 540 LSHEQLFSII DFSPSWAYEG SEIKVLLSGR FLTSHQEVEN SKWSCMFGEV EVPAEIIANG 600 VLRCFTPIHK AGRVPFYVTC SNRLACSEVR EFEYRVKCIQ NFVVMDDHSS NTFEALALRF 660 VKLLCLSCPS TLIADPNSSD GSSNSNKISE LLKEDKSEWG QLINPKWDDN FSFESAKELL 720 LQNLLKEKLH VWLLQKVREG GKGPSVLDEH GQGVLHFAAA LNYDWALLPS IVAGINVNFR 780 DANGWTALHW AAFFGRERVV AALISMGAAP GLLTDPSPKH PSGRTPADLA SLNGHKGIAG 840 YLAESDLSAR LESLAFDSQE SKSAETCGAR AVQTATERVA TPHDGNDIHT LSLKDSLAAV 900 SNATQAAARI HEVMRVQSFQ RKQLELKYRD DRLDMLHDQA LSVLAVKRGI PGPHDKHAAA 960 IRIQNKFRSW KNRKDFLIIR QRIVKIQAHV RGHQVRKNYR TIVWSVGILE KLILRWRRKG 1020 SGLRGFKPEA PAESSKKITL VAEDDDDFLK QGRKQTEERL QKALARVKSM VQYPEARDQY 1080 RRLLNVVSEM QEIKVVKNGA LDNVDETADF DDLIDIETLL GEDNFMPTAI

Sequence ? help Back to Top

Protein Sequence Length: 1130 aa Download sequence

MAENRCCIPA NPIGIEQILL EAQHRWLRPA EICEILNNYE KFSIASEPAN MPPSGSLFLY  60
DRKVLRYFRK DGHNWRKKKD GKAVKEAHER LKAGSVYALH CYYAHGEENE NFQRRTYWLL  120
EEDLSHIVLV HYREVQSSRA NLNRNRGTHE AVLVSREFEE TTSHSEMDAS NSSSFHPSNY  180
QIPSQTTEIS LNSAQVSEYE DVESGACIVY ELQINHSSEL KSFPGYFCHF FNNVLLIDIL  240
SFAEYSSQAS TVFHSFLGLQ RPRMERFGAD LCDPNYPISL SVFSGNGFPT TSDRSKDNNS  300
AGLNCVPQKN LNFSSENVLE SGSTGIYSSN LEPSLSASQP EISGDVPKQG DEVLRMLFTE  360
KCKRKEFNNH LHSQEDCQTS QRNSSPLVRW PIDQQTLQAD LVCNVASKFH QLDHVNVVNS  420
MQSSQMNTGP QNDQSMQEHL QQMLPNTKHE YYLNSISDGK VILEGKANFP KKQPLLDAIT  480
SEGLKKSDSF NQWMNRELGD VNEASMQSNS GAYWNSVENE VGHSSISSQV HPDAYMFSPS  540
LSHEQLFSII DFSPSWAYEG SEIKVLLSGR FLTSHQEVEN SKWSCMFGEV EVPAEIIANG  600
VLRCFTPIHK AGRVPFYVTC SNRLACSEVR EFEYRVKCIQ NFVVMDDHSS NTFEALALRF  660
VKLLCLSCPS TLIADPNSSD GSSNSNKISE LLKEDKSEWG QLINPKWDDN FSFESAKELL  720
LQNLLKEKLH VWLLQKVREG GKGPSVLDEH GQGVLHFAAA LNYDWALLPS IVAGINVNFR  780
DANGWTALHW AAFFGRERVV AALISMGAAP GLLTDPSPKH PSGRTPADLA SLNGHKGIAG  840
YLAESDLSAR LESLAFDSQE SKSAETCGAR AVQTATERVA TPHDGNDIHT LSLKDSLAAV  900
SNATQAAARI HEVMRVQSFQ RKQLELKYRD DRLDMLHDQA LSVLAVKRGI PGPHDKHAAA  960
IRIQNKFRSW KNRKDFLIIR QRIVKIQAHV RGHQVRKNYR TIVWSVGILE KLILRWRRKG  1020
SGLRGFKPEA PAESSKKITL VAEDDDDFLK QGRKQTEERL QKALARVKSM VQYPEARDQY  1080
RRLLNVVSEM QEIKVVKNGA LDNVDETADF DDLIDIETLL GEDNFMPTAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein