PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136625.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Nin-like

Protein Properties

Length: 996aa MW: 109980 Da PI: 5.3312

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136625.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.4	3.4e-29	590	641	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_022136625.1 590 AEKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 641 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 996 aa Download sequence
MTEPDADHPS GFCPKSGNRP PSADDRTPLM DFDLDLDISW PLDQIHSFAS NPMSPFLIST 60 SDHLGSPLWA FSEADDDHDS KFVNDACSVL GTSNSNSVAQ KPTENHKFKI LPVPSSSWGL 120 TPSENPDGYC LIKEKMAQAL RYIKESSDQH VLAQVWAPIK RDGKVVLSTY GQPFVLDTQS 180 NGLHQYRMVS LMFMFSLDTD PDGYLGLPGR VYQQKLPEWT PNVQYYSSKE YPRLSHALHY 240 NVQGTLALPV FDPSGQSCLG VLELIMTSPK INYAPEVDKI CKALEAVNLK SSEILDRANN 300 QICNEGRQNA LAEILEVLTV VCETHNLPLA QTWVPCRHRN VLAYGGGFKK NCTTFDGSCM 360 GRICMSATEV AFYVVDAHMW GFREACLEHH LQKGQGVSGR AFSSHSSCFC GDITQFCKTE 420 YPLVHYALMF GLKSCFSICL RSTFTGDDEY ILEFFLPPSI VDYQEQKNLL GALMATMKQH 480 FYTLKVASGI NLEEEEGLVE VIQASGNEGF ESRLEYIQIP QPMELPPKTD AMANAGEIAA 540 SEPLKQQSFV VGDAAKDENN SAREGENHNP VPCPQNKEVK KPSERKRGKA EKSISLEVLQ 600 QYFAGSLKDA AKSLGVCPTT MKRICRQHGI SRWPSRKINK VNRSLSKLKR VIESVQGAEG 660 AFGISSLATS PIPVTVSSSS HPLTPDGSNQ QNFAASQPSD PQHKETNTSE TQTYDTRARL 720 DDQLHRGVLS PEELIHEQNG FLPKFANGLN NYRTGSGSRE GSIGTPTSHG SCQGSPANDS 780 AAVANNPLSI PHQEQCVRRE SPEVTLHPMD RLNILAPACP IPDTLAMVEA EEPFGGMLIE 840 DAGSSKDLKN LCASVGDAVL DEQILEFSWP NPPDNQALKQ PMDSTICHTV PHISVRQEPR 900 RMTIKATYKE DIIRFRIPLS SGIVELREEV AKRLKLEVGT FDIKYMDDDR EWVLIACDAD 960 LQECVDISRS SGSNIIRLLV HDLTVNLGSS CESTGE

Sequence ? help Back to Top

Protein Sequence Length: 996 aa Download sequence

MTEPDADHPS GFCPKSGNRP PSADDRTPLM DFDLDLDISW PLDQIHSFAS NPMSPFLIST  60
SDHLGSPLWA FSEADDDHDS KFVNDACSVL GTSNSNSVAQ KPTENHKFKI LPVPSSSWGL  120
TPSENPDGYC LIKEKMAQAL RYIKESSDQH VLAQVWAPIK RDGKVVLSTY GQPFVLDTQS  180
NGLHQYRMVS LMFMFSLDTD PDGYLGLPGR VYQQKLPEWT PNVQYYSSKE YPRLSHALHY  240
NVQGTLALPV FDPSGQSCLG VLELIMTSPK INYAPEVDKI CKALEAVNLK SSEILDRANN  300
QICNEGRQNA LAEILEVLTV VCETHNLPLA QTWVPCRHRN VLAYGGGFKK NCTTFDGSCM  360
GRICMSATEV AFYVVDAHMW GFREACLEHH LQKGQGVSGR AFSSHSSCFC GDITQFCKTE  420
YPLVHYALMF GLKSCFSICL RSTFTGDDEY ILEFFLPPSI VDYQEQKNLL GALMATMKQH  480
FYTLKVASGI NLEEEEGLVE VIQASGNEGF ESRLEYIQIP QPMELPPKTD AMANAGEIAA  540
SEPLKQQSFV VGDAAKDENN SAREGENHNP VPCPQNKEVK KPSERKRGKA EKSISLEVLQ  600
QYFAGSLKDA AKSLGVCPTT MKRICRQHGI SRWPSRKINK VNRSLSKLKR VIESVQGAEG  660
AFGISSLATS PIPVTVSSSS HPLTPDGSNQ QNFAASQPSD PQHKETNTSE TQTYDTRARL  720
DDQLHRGVLS PEELIHEQNG FLPKFANGLN NYRTGSGSRE GSIGTPTSHG SCQGSPANDS  780
AAVANNPLSI PHQEQCVRRE SPEVTLHPMD RLNILAPACP IPDTLAMVEA EEPFGGMLIE  840
DAGSSKDLKN LCASVGDAVL DEQILEFSWP NPPDNQALKQ PMDSTICHTV PHISVRQEPR  900
RMTIKATYKE DIIRFRIPLS SGIVELREEV AKRLKLEVGT FDIKYMDDDR EWVLIACDAD  960
LQECVDISRS SGSNIIRLLV HDLTVNLGSS CESTGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein