PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136411.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 811aa MW: 94077.4 Da PI: 7.5431

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	87.4	2.2e-27	47	134	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ ++++t+Cka+++vk++ dg+w ++++ ++HnHel p XP_022136411.1 47 SFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESDSG---NSRRPSVKKTDCKASMHVKRRPDGRWIIHEFIKDHNHELLP 134 5**************************************999888...7788899*****************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 811 aa Download sequence
MVDVVAEMHH GDGGVVSLPK RDILFEGDID FEPHNGIEFD SHEAAYSFYQ EYAKSMGFTT 60 SIKNSRRSKK SKEFIDAKFA CSRYGVTPES DSGNSRRPSV KKTDCKASMH VKRRPDGRWI 120 IHEFIKDHNH ELLPALAYHF RIHRNVKLAE KNNIDILHAV SERTRRMYVE MSKKCGGYRN 180 VSFPQMDMTC QFDKGRYLAL DEGDAQILLE YFKRIQKENP YFFYAIDLNE EQRLRNLFWV 240 DAKSRNDYVS FNDVVSFDIS YIKSNDKLPF APFIGVNHHS QSMMLGCALA ADWTKPTFTW 300 LFKTWLRAMG GQAPKVIITD QDKALKLAIE EVFPNTRHCF SLWHILEKIP DNLAHVIKRH 360 ENFLSKFNKC IFKSWTDEQF DMRWWKMVTR FELQDDDWIQ SLYDDRKKWV PTFMDDIFLA 420 GMSTSQRSDS MNAFFDKYIH KKITLKEFVK QYGAILQNRY EEEAIADFDT LHKQPALKSP 480 SPWEKQMSTI YTHTIFKKFQ NEVLGVVGCH PRKESEDGAI TTFRVQDCEK DEHFLVRLHE 540 LNSEVSCFCR LFEYKGFLCR HALIVLQILG FSSIPPQYIL KRWTKDAKSR QSISEGTEFR 600 QNRVQRYNDL CKRAIELSEE GSISEECYNI AIRTLVEALK TCVNINNSKS APAESSVNAH 660 GLREEEEENQ GSITAKTNKR KSTSRKRKVQ AETDMIIVEG QENLQQMDSL TSDSLTMNGY 720 YGTQQNVQGL VQLNLMEPPH DASSYYVSQQ SIQGLGQLNT IATNHDGYFG AQHNSIHALV 780 DYRPATSYNY SLQDEQHLRS AQLHGSTSRH T

Sequence ? help Back to Top

Protein Sequence Length: 811 aa Download sequence

MVDVVAEMHH GDGGVVSLPK RDILFEGDID FEPHNGIEFD SHEAAYSFYQ EYAKSMGFTT  60
SIKNSRRSKK SKEFIDAKFA CSRYGVTPES DSGNSRRPSV KKTDCKASMH VKRRPDGRWI  120
IHEFIKDHNH ELLPALAYHF RIHRNVKLAE KNNIDILHAV SERTRRMYVE MSKKCGGYRN  180
VSFPQMDMTC QFDKGRYLAL DEGDAQILLE YFKRIQKENP YFFYAIDLNE EQRLRNLFWV  240
DAKSRNDYVS FNDVVSFDIS YIKSNDKLPF APFIGVNHHS QSMMLGCALA ADWTKPTFTW  300
LFKTWLRAMG GQAPKVIITD QDKALKLAIE EVFPNTRHCF SLWHILEKIP DNLAHVIKRH  360
ENFLSKFNKC IFKSWTDEQF DMRWWKMVTR FELQDDDWIQ SLYDDRKKWV PTFMDDIFLA  420
GMSTSQRSDS MNAFFDKYIH KKITLKEFVK QYGAILQNRY EEEAIADFDT LHKQPALKSP  480
SPWEKQMSTI YTHTIFKKFQ NEVLGVVGCH PRKESEDGAI TTFRVQDCEK DEHFLVRLHE  540
LNSEVSCFCR LFEYKGFLCR HALIVLQILG FSSIPPQYIL KRWTKDAKSR QSISEGTEFR  600
QNRVQRYNDL CKRAIELSEE GSISEECYNI AIRTLVEALK TCVNINNSKS APAESSVNAH  660
GLREEEEENQ GSITAKTNKR KSTSRKRKVQ AETDMIIVEG QENLQQMDSL TSDSLTMNGY  720
YGTQQNVQGL VQLNLMEPPH DASSYYVSQQ SIQGLGQLNT IATNHDGYFG AQHNSIHALV  780
DYRPATSYNY SLQDEQHLRS AQLHGSTSRH T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein