PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136409.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

FAR1

Protein Properties

Length: 846aa MW: 97310 Da PI: 6.8813

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136409.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.5	8.4e-27	88	190	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g ++e +k+ +e++ +ra +t+Cka+++vk++ dgkw+++++++ XP_022136409.1 88 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGIKREYDKSfnrprvrqtkqeSENATGRRACAKTDCKASMHVKRRADGKWVIHSFVK 182 5*****************************************99999997655555555999*********************** PP FAR1 84 eHnHelap 91 eHnHel p XP_022136409.1 183 EHNHELLP 190 ***975 PP

Sequence ? help Back to Top
Protein Sequence Length: 846 aa Download sequence
MDIDLRLPSG EHDKDEEPNA INNMLDVEEK LHNGDIESGN MVDATDAMHV EDGGDLNSPM 60 LDMAMFKDDT NLEPLPGMEF ESHGEAYSFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF 120 ACSRYGIKRE YDKSFNRPRV RQTKQESENA TGRRACAKTD CKASMHVKRR ADGKWVIHSF 180 VKEHNHELLP AQAVSEQTRK MYAAMARQFA EYKSVVGLKN DSKNPFDKVR SLAFDVGDAR 240 TLLDFFTQMQ NLNSNFFYAV DIGEDHRLRN LFWIDAKSRH DYIYFNDVVS LDTTYIRNKY 300 KLPLAFFVGV NQHYQFMLIG CALLSDESPT TYAWLLHTWL KAIGGQAPKV VITDHDKVLK 360 SVIPEVLPNV YHHFTLWHIF GKISENLGNV IKQHENFMAK FEKCIYRSWT NEEFEKRWWK 420 LVERFELKED ELVQSLWEGQ RHWAPMYVKD VFLAGMSAAQ RSESVNCFLD KYLHKKTTVL 480 EFVKQYETIL QDRYEEEAKA DSDTWNKQPT LKSPSPFEKS VSGLYTHAVF KKFQVEVLGA 540 VACHPKREKQ DEKSITYRVQ DFEKNQDFIV DWNELKSEVS CLCRLYEYKG YLCRHAMIVL 600 QICGLSAIPA QYILKRWTKD AKNRQLMGEE SEPLQSRVQR YNDLCQRALK LIEEGSLSQE 660 SYSIAVHALD ETLGNCISVN NSNRTLLEPG TSAAHGLLCI EEDNQIRNMG KTSKKKNPTK 720 KRKVNAEPDV MTVGAQDSLQ QMDKLASRAV TLDGYFGTQP SVQGMVQLNL MAPTRDNYYG 780 NQQAIQGLGQ LNSIAPSHDG YYAAQQSIHG LGQMDFFRAP TGFTYSMRDD PNVRTTQLHD 840 DASRHA

Sequence ? help Back to Top

Protein Sequence Length: 846 aa Download sequence

MDIDLRLPSG EHDKDEEPNA INNMLDVEEK LHNGDIESGN MVDATDAMHV EDGGDLNSPM  60
LDMAMFKDDT NLEPLPGMEF ESHGEAYSFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF  120
ACSRYGIKRE YDKSFNRPRV RQTKQESENA TGRRACAKTD CKASMHVKRR ADGKWVIHSF  180
VKEHNHELLP AQAVSEQTRK MYAAMARQFA EYKSVVGLKN DSKNPFDKVR SLAFDVGDAR  240
TLLDFFTQMQ NLNSNFFYAV DIGEDHRLRN LFWIDAKSRH DYIYFNDVVS LDTTYIRNKY  300
KLPLAFFVGV NQHYQFMLIG CALLSDESPT TYAWLLHTWL KAIGGQAPKV VITDHDKVLK  360
SVIPEVLPNV YHHFTLWHIF GKISENLGNV IKQHENFMAK FEKCIYRSWT NEEFEKRWWK  420
LVERFELKED ELVQSLWEGQ RHWAPMYVKD VFLAGMSAAQ RSESVNCFLD KYLHKKTTVL  480
EFVKQYETIL QDRYEEEAKA DSDTWNKQPT LKSPSPFEKS VSGLYTHAVF KKFQVEVLGA  540
VACHPKREKQ DEKSITYRVQ DFEKNQDFIV DWNELKSEVS CLCRLYEYKG YLCRHAMIVL  600
QICGLSAIPA QYILKRWTKD AKNRQLMGEE SEPLQSRVQR YNDLCQRALK LIEEGSLSQE  660
SYSIAVHALD ETLGNCISVN NSNRTLLEPG TSAAHGLLCI EEDNQIRNMG KTSKKKNPTK  720
KRKVNAEPDV MTVGAQDSLQ QMDKLASRAV TLDGYFGTQP SVQGMVQLNL MAPTRDNYYG  780
NQQAIQGLGQ LNSIAPSHDG YYAAQQSIHG LGQMDFFRAP TGFTYSMRDD PNVRTTQLHD  840
DASRHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein