PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022136402.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family ERF
Protein Properties Length: 357aa    MW: 39204.6 Da    PI: 6.7403
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022136402.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.7e-20172221255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  XP_022136402.1 172 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDRAAFKLRG 221
                     59******9.**********955...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MAAAMDFYNE GPQTEHFGGE LMEAIEPFIK VASSSSSSLS TNFPSSSSPS LPSSSFNSYL  60
SFSHSEQSIV YSNGGSTSMN PVFSDGFSNQ NLIGFEQPSF TVGPHQLSSP QIPHSQPHIN  120
LLQEQAPLAF GWGQNHEPHQ PLPCYEQRVA SFLSPKPIPM KQVGSSAKST KLYRGVRQRH  180
WGKWVAEIRL PRNRTRLWLG TFDTAEEAAL AYDRAAFKLR GDSARLNFPH LKHQGSCVEG  240
EFGEYRPLHS SVDAKLQAIC ENLSKPQKKQ GNSKKSVSAA KKSRSQSCSS AAETVAAKVE  300
NSPSLAVTES DGSAASSPLS DLTFPEFTEL QWDQNQAWDN SMLEKYPSEI DWASLLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.16e-60ERF family protein