PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022136271.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 230aa MW: 26584.4 Da PI: 9.2916 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.4 | 4.4e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvt+skRrng++KKA+EL vLCda v++i+fsstgkl+ey+s XP_022136271.1 9 KRIENPTNRQVTYSKRRNGLFKKANELTVLCDATVSIIMFSSTGKLHEYIS 59 79***********************************************86 PP | |||||||
2 | K-box | 95.4 | 9e-32 | 71 | 169 | 1 | 99 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yqk+ g++l+ +++e++q++l+kLk+ ++nL+r++R+++Ge++++Ls++eL+ Leq+++++++ iR++K++++ +qie+ +kk k++ e++k+L XP_022136271.1 71 YQKTLGVDLWISHYERMQENLKKLKDVNRNLRRQIRQRMGECMNDLSFEELRCLEQDMDNAVRIIRERKYRVISNQIETHKKKLKSVGEIHKSLL 165 7899999***************************************************************************************9 PP K-box 96 kkle 99 ++++ XP_022136271.1 166 QEFD 169 9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MARGKIQIKR IENPTNRQVT YSKRRNGLFK KANELTVLCD ATVSIIMFSS TGKLHEYISP 60 ATSTKELFDQ YQKTLGVDLW ISHYERMQEN LKKLKDVNRN LRRQIRQRMG ECMNDLSFEE 120 LRCLEQDMDN AVRIIRERKY RVISNQIETH KKKLKSVGEI HKSLLQEFDI ATEEDPHYGL 180 VDNGGVGGDY DSIMGFSGGG PRIFALRLQP NHPNIHHAPP PDLTTYPLLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 2e-94 | MIKC_MADS family protein |