PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022136078.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

DBB

Protein Properties

Length: 316aa MW: 34883.9 Da PI: 4.8173

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022136078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26.5	1.4e-08	32	72	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......H 37 C+ +++ e+ lfC+ ++ lCe C H+ H XP_022136078.1 32 IQCDACNKDEALLFCTADDAALCEACDHRVHRAnilaskhH 72 57****99*******************7678888844 PP
2	zf-B_box	24	8.2e-08	85	116	4	35
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 + C+ ++e ++ lfC++++ lC+dC l +H XP_022136078.1 85 PLCDICQERRAFLFCQQDRAILCRDCDLPIHA 116 57**************************9993 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MNLLGTCAPF YCPFQEVSQK SRGKKEKREM KIQCDACNKD EALLFCTADD AALCEACDHR 60 VHRANILASK HHRFPLLHPS NDHFPLCDIC QERRAFLFCQ QDRAILCRDC DLPIHAVNEL 120 TQKHDRFLLT GIKLSCVSAL NAASSSSEAS FAFNSDPNSQ PLFEKTANAS APVSHSPSLA 180 ESSMSNVPVA AASADGGDPT DTVSEYLIET IPGWNLEEFL DSSSAPFGFY KLQSDDGDWV 240 FPFLDDLVEL ETSRDSLASV PLFCTEVSWE IELNERNGGG NEKARGGGGG GGRWSRRDDG 300 FTVPEICVWS RRYRSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	285	293	RGGGGGGGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	2e-64	DBB family protein