PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135754.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HB-other

Protein Properties

Length: 1755aa MW: 197167 Da PI: 5.9685

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.2	5e-17	19	73	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+++ + yps++ r+eL+ klgL++rq ++WF+ rR k++k XP_022135754.1 19 KRKMKTASQLEILEKAYTVEAYPSEALRAELSVKLGLSDRQLQMWFCYRRLKDRK 73 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1755 aa Download sequence
MECSCEGEKK PPAGANKIKR KMKTASQLEI LEKAYTVEAY PSEALRAELS VKLGLSDRQL 60 QMWFCYRRLK DRKAPSVKRP RKSSPAMAGA AVANPVGGSG EKIMAGNLGY ESSSGLGMGS 120 NVYAHPVDMR LAGQRPGVAN ARIGVNSPSM KRFYESQQSI AELRAMALIE AQLGEPLRED 180 GPVLGMEFDP LPPGAFGAPI GATTNIDEKK AGQVFEVSAY KQRDVEQIEH HQISGRTLHE 240 YKFLPEQPTV KLDRHERGAS SYQYDSHANV QNMSRTQSIA SGHSFLHGHE QVSSGYFSQG 300 QMPNLNIFSQ QSRRGHLLLS SMGEHDSSLC KSSLVNISMD PEYGTHRTTQ PEYTSILSDQ 360 SVVHGNNVLW IEKKHKNDEA RIAREVEAHE KRMRKELEKQ DALRRKREEQ IRKEMERHDR 420 ERQREEERLS REKQKEEERY LREQRRETLR REKFLRRESI RAERTRQKEA LRREREAARL 480 KAANQRAIAR RMAKESMELA DDERLELMEL AVSSKGLPSI MSLDHETLEN LELFEVMRPT 540 FPPESVKMKM PFLSHPWTDS EVNVGNLLMV WKFLVTFADV LGLWPFTLDE FVQAFHDHDS 600 RLLGEVHVAL LRCIIKDIED VTRSPSAGLG SNQSSAPNPG GGHLYVVEGA YAWGFDICSW 660 QHHLNPLTWP EILRQLALSA GFGPQLVKGG NAEPAYLRDE NEGNDVAGII SNLRNGLAAE 720 NAVAIMHERG LSNQRRSRHR LTPGTVKFAA FHVLSLEGSK GLPVVEVADK IQKSGLRDLT 780 TSRTPEASIA AALSRDSKLF ERTAPSTYCV RSPYRRDPGD ADAILSTARE RIHILKSGFL 840 DGEDAERNDD SEVDVAEDPE VDDLGIEGNS MKEHQSHEVC PFDEMTSVTS GKGSNEVRDS 900 LEVGMENGGP YTSVLDFEGR VKGEESPIEQ PIYITGSCTG QNQEDSDVGD HGEPWVKGLT 960 EGEYSDLSVE ERLNALCSLI GVALEGNSMR TVLEERLEAA NSLKKQMLAE AQLDRRRARE 1020 EYVMQINESL NVGNKPEHKT ISSTDARHSP IPNVGEEKSE GPLDTDTGFQ QEDCSKSRNN 1080 SYPLNDDFPS EGKLLAQDVP LEADHSQFKQ SVLTIEKSRS QLKSYIGHKA EEMYVYRSLP 1140 LGQDRRCNRY WQFTSSASRN EPGNGRIFVE LHNGSWRLID SAEGFDSLLA SLDIRGIRES 1200 HLHLMLRKLE NSFKAAVRGK ILQDIQSKGE GAAGHDYNAH TYGSVTTLCA DDSDAFDSST 1260 SFRSEPEETG SRKTETLKRY HDFESWMRSE CFSLSILSAD KYGKKQGRQL LGICNHCQCF 1320 YSESSNHCRS CHETRRISDL YFSEHESRCK ENISISWCSS SPLRIRLLKM LLTVIEASIP 1380 VEAFQPSWTD FQRKTWGSRL LSSSSAEELL QILTLLENVI KRDVMRSNYE TTYELLACIN 1440 PPGNSICRSS PETVPVLSWI PLTTAAVALR LLEFDASLSY ILQQKAESHD HGSRDIKHLS 1500 NYVAVKNNQD SETAVISNEY VKESNWIDCG VGLSRTNHRR SDCKGGHGRT RGGKSQKRSS 1560 GSRAVSGKRS TGTNRQILRQ VLMWKDGQVD ETGGSRCGRR SIRNRQKSAS KIKFGSEGGG 1620 HPEETIHEKL ELSLDNNQEW NNDQDLEQID GSPSSSDRLL SIDDNGGVEY DDMLVDVCAR 1680 SRRSGYVLAS RSYDMDEDKE DDLYDDGERG NVMDGGDLYV EQYINGEYNE ESNKDLEHNM 1740 VSDEEMQSAS SDYSI

Sequence ? help Back to Top

Protein Sequence Length: 1755 aa Download sequence

MECSCEGEKK PPAGANKIKR KMKTASQLEI LEKAYTVEAY PSEALRAELS VKLGLSDRQL  60
QMWFCYRRLK DRKAPSVKRP RKSSPAMAGA AVANPVGGSG EKIMAGNLGY ESSSGLGMGS  120
NVYAHPVDMR LAGQRPGVAN ARIGVNSPSM KRFYESQQSI AELRAMALIE AQLGEPLRED  180
GPVLGMEFDP LPPGAFGAPI GATTNIDEKK AGQVFEVSAY KQRDVEQIEH HQISGRTLHE  240
YKFLPEQPTV KLDRHERGAS SYQYDSHANV QNMSRTQSIA SGHSFLHGHE QVSSGYFSQG  300
QMPNLNIFSQ QSRRGHLLLS SMGEHDSSLC KSSLVNISMD PEYGTHRTTQ PEYTSILSDQ  360
SVVHGNNVLW IEKKHKNDEA RIAREVEAHE KRMRKELEKQ DALRRKREEQ IRKEMERHDR  420
ERQREEERLS REKQKEEERY LREQRRETLR REKFLRRESI RAERTRQKEA LRREREAARL  480
KAANQRAIAR RMAKESMELA DDERLELMEL AVSSKGLPSI MSLDHETLEN LELFEVMRPT  540
FPPESVKMKM PFLSHPWTDS EVNVGNLLMV WKFLVTFADV LGLWPFTLDE FVQAFHDHDS  600
RLLGEVHVAL LRCIIKDIED VTRSPSAGLG SNQSSAPNPG GGHLYVVEGA YAWGFDICSW  660
QHHLNPLTWP EILRQLALSA GFGPQLVKGG NAEPAYLRDE NEGNDVAGII SNLRNGLAAE  720
NAVAIMHERG LSNQRRSRHR LTPGTVKFAA FHVLSLEGSK GLPVVEVADK IQKSGLRDLT  780
TSRTPEASIA AALSRDSKLF ERTAPSTYCV RSPYRRDPGD ADAILSTARE RIHILKSGFL  840
DGEDAERNDD SEVDVAEDPE VDDLGIEGNS MKEHQSHEVC PFDEMTSVTS GKGSNEVRDS  900
LEVGMENGGP YTSVLDFEGR VKGEESPIEQ PIYITGSCTG QNQEDSDVGD HGEPWVKGLT  960
EGEYSDLSVE ERLNALCSLI GVALEGNSMR TVLEERLEAA NSLKKQMLAE AQLDRRRARE  1020
EYVMQINESL NVGNKPEHKT ISSTDARHSP IPNVGEEKSE GPLDTDTGFQ QEDCSKSRNN  1080
SYPLNDDFPS EGKLLAQDVP LEADHSQFKQ SVLTIEKSRS QLKSYIGHKA EEMYVYRSLP  1140
LGQDRRCNRY WQFTSSASRN EPGNGRIFVE LHNGSWRLID SAEGFDSLLA SLDIRGIRES  1200
HLHLMLRKLE NSFKAAVRGK ILQDIQSKGE GAAGHDYNAH TYGSVTTLCA DDSDAFDSST  1260
SFRSEPEETG SRKTETLKRY HDFESWMRSE CFSLSILSAD KYGKKQGRQL LGICNHCQCF  1320
YSESSNHCRS CHETRRISDL YFSEHESRCK ENISISWCSS SPLRIRLLKM LLTVIEASIP  1380
VEAFQPSWTD FQRKTWGSRL LSSSSAEELL QILTLLENVI KRDVMRSNYE TTYELLACIN  1440
PPGNSICRSS PETVPVLSWI PLTTAAVALR LLEFDASLSY ILQQKAESHD HGSRDIKHLS  1500
NYVAVKNNQD SETAVISNEY VKESNWIDCG VGLSRTNHRR SDCKGGHGRT RGGKSQKRSS  1560
GSRAVSGKRS TGTNRQILRQ VLMWKDGQVD ETGGSRCGRR SIRNRQKSAS KIKFGSEGGG  1620
HPEETIHEKL ELSLDNNQEW NNDQDLEQID GSPSSSDRLL SIDDNGGVEY DDMLVDVCAR  1680
SRRSGYVLAS RSYDMDEDKE DDLYDDGERG NVMDGGDLYV EQYINGEYNE ESNKDLEHNM  1740
VSDEEMQSAS SDYSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein