PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135752.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

HB-other

Protein Properties

Length: 1763aa MW: 197906 Da PI: 5.9685

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135752.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.2	5e-17	19	73	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+++ + yps++ r+eL+ klgL++rq ++WF+ rR k++k XP_022135752.1 19 KRKMKTASQLEILEKAYTVEAYPSEALRAELSVKLGLSDRQLQMWFCYRRLKDRK 73 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1763 aa Download sequence
MECSCEGEKK PPAGANKIKR KMKTASQLEI LEKAYTVEAY PSEALRAELS VKLGLSDRQL 60 QMWFCYRRLK DRKAPSVKRP RKSSPAMAGA AVANPVGGSG EKIMAGNLGY ESSSGLGMGS 120 NVYAHPVDMR LAGQRPGVAN ARIGVNSPSM KRFYESQQSI AELRAMALIE AQLGEPLRED 180 GPVLGMEFDP LPPGAFGAPI GATTNIDEKK AGQVFEVSAY KQRDVEQIEH HQISGRTLHE 240 YKFLPEQPTV KLDRHERGAS SYQYDSHANV QNMSRTQSIA SGHSFLHGHE QVSSGYFSQG 300 QMPNLNIFSQ QSRRGHLLLS SMGEHDSSLC KSSLVNISMD PEYGTHRTTQ PEYTSILSDQ 360 SVVHGNNVLW IEKKHKNDEA RIAREVEAHE KRMRKELEKQ DALRRKREEQ IRKEMERHDR 420 ERQREEERLS REKQKEEERY LREQRRETLR REKFLRRESI RAERTRQKEA LRREREAARL 480 KAANQRAIAR RMAKESMELA DDERLELMEL AVSSKGLPSI MSLDHETLEN LELFEGLGSS 540 SMAFMRPTFP PESVKMKMPF LSHPWTDSEV NVGNLLMVWK FLVTFADVLG LWPFTLDEFV 600 QAFHDHDSRL LGEVHVALLR CIIKDIEDVT RSPSAGLGSN QSSAPNPGGG HLYVVEGAYA 660 WGFDICSWQH HLNPLTWPEI LRQLALSAGF GPQLVKGGNA EPAYLRDENE GNDVAGIISN 720 LRNGLAAENA VAIMHERGLS NQRRSRHRLT PGTVKFAAFH VLSLEGSKGL PVVEVADKIQ 780 KSGLRDLTTS RTPEASIAAA LSRDSKLFER TAPSTYCVRS PYRRDPGDAD AILSTARERI 840 HILKSGFLDG EDAERNDDSE VDVAEDPEVD DLGIEGNSMK EHQSHEVCPF DEMTSVTSGK 900 GSNEVRDSLE VGMENGGPYT SVLDFEGRVK GEESPIEQPI YITGSCTGQN QEDSDVGDHG 960 EPWVKGLTEG EYSDLSVEER LNALCSLIGV ALEGNSMRTV LEERLEAANS LKKQMLAEAQ 1020 LDRRRAREEY VMQINESLNV GNKPEHKTIS STDARHSPIP NVGEEKSEGP LDTDTGFQQE 1080 DCSKSRNNSY PLNDDFPSEG KLLAQDVPLE ADHSQFKQSV LTIEKSRSQL KSYIGHKAEE 1140 MYVYRSLPLG QDRRCNRYWQ FTSSASRNEP GNGRIFVELH NGSWRLIDSA EGFDSLLASL 1200 DIRGIRESHL HLMLRKLENS FKAAVRGKIL QDIQSKGEGA AGHDYNAHTY GSVTTLCADD 1260 SDAFDSSTSF RSEPEETGSR KTETLKRYHD FESWMRSECF SLSILSADKY GKKQGRQLLG 1320 ICNHCQCFYS ESSNHCRSCH ETRRISDLYF SEHESRCKEN ISISWCSSSP LRIRLLKMLL 1380 TVIEASIPVE AFQPSWTDFQ RKTWGSRLLS SSSAEELLQI LTLLENVIKR DVMRSNYETT 1440 YELLACINPP GNSICRSSPE TVPVLSWIPL TTAAVALRLL EFDASLSYIL QQKAESHDHG 1500 SRDIKHLSNY VAVKNNQDSE TAVISNEYVK ESNWIDCGVG LSRTNHRRSD CKGGHGRTRG 1560 GKSQKRSSGS RAVSGKRSTG TNRQILRQVL MWKDGQVDET GGSRCGRRSI RNRQKSASKI 1620 KFGSEGGGHP EETIHEKLEL SLDNNQEWNN DQDLEQIDGS PSSSDRLLSI DDNGGVEYDD 1680 MLVDVCARSR RSGYVLASRS YDMDEDKEDD LYDDGERGNV MDGGDLYVEQ YINGEYNEES 1740 NKDLEHNMVS DEEMQSASSD YSI

Sequence ? help Back to Top

Protein Sequence Length: 1763 aa Download sequence

MECSCEGEKK PPAGANKIKR KMKTASQLEI LEKAYTVEAY PSEALRAELS VKLGLSDRQL  60
QMWFCYRRLK DRKAPSVKRP RKSSPAMAGA AVANPVGGSG EKIMAGNLGY ESSSGLGMGS  120
NVYAHPVDMR LAGQRPGVAN ARIGVNSPSM KRFYESQQSI AELRAMALIE AQLGEPLRED  180
GPVLGMEFDP LPPGAFGAPI GATTNIDEKK AGQVFEVSAY KQRDVEQIEH HQISGRTLHE  240
YKFLPEQPTV KLDRHERGAS SYQYDSHANV QNMSRTQSIA SGHSFLHGHE QVSSGYFSQG  300
QMPNLNIFSQ QSRRGHLLLS SMGEHDSSLC KSSLVNISMD PEYGTHRTTQ PEYTSILSDQ  360
SVVHGNNVLW IEKKHKNDEA RIAREVEAHE KRMRKELEKQ DALRRKREEQ IRKEMERHDR  420
ERQREEERLS REKQKEEERY LREQRRETLR REKFLRRESI RAERTRQKEA LRREREAARL  480
KAANQRAIAR RMAKESMELA DDERLELMEL AVSSKGLPSI MSLDHETLEN LELFEGLGSS  540
SMAFMRPTFP PESVKMKMPF LSHPWTDSEV NVGNLLMVWK FLVTFADVLG LWPFTLDEFV  600
QAFHDHDSRL LGEVHVALLR CIIKDIEDVT RSPSAGLGSN QSSAPNPGGG HLYVVEGAYA  660
WGFDICSWQH HLNPLTWPEI LRQLALSAGF GPQLVKGGNA EPAYLRDENE GNDVAGIISN  720
LRNGLAAENA VAIMHERGLS NQRRSRHRLT PGTVKFAAFH VLSLEGSKGL PVVEVADKIQ  780
KSGLRDLTTS RTPEASIAAA LSRDSKLFER TAPSTYCVRS PYRRDPGDAD AILSTARERI  840
HILKSGFLDG EDAERNDDSE VDVAEDPEVD DLGIEGNSMK EHQSHEVCPF DEMTSVTSGK  900
GSNEVRDSLE VGMENGGPYT SVLDFEGRVK GEESPIEQPI YITGSCTGQN QEDSDVGDHG  960
EPWVKGLTEG EYSDLSVEER LNALCSLIGV ALEGNSMRTV LEERLEAANS LKKQMLAEAQ  1020
LDRRRAREEY VMQINESLNV GNKPEHKTIS STDARHSPIP NVGEEKSEGP LDTDTGFQQE  1080
DCSKSRNNSY PLNDDFPSEG KLLAQDVPLE ADHSQFKQSV LTIEKSRSQL KSYIGHKAEE  1140
MYVYRSLPLG QDRRCNRYWQ FTSSASRNEP GNGRIFVELH NGSWRLIDSA EGFDSLLASL  1200
DIRGIRESHL HLMLRKLENS FKAAVRGKIL QDIQSKGEGA AGHDYNAHTY GSVTTLCADD  1260
SDAFDSSTSF RSEPEETGSR KTETLKRYHD FESWMRSECF SLSILSADKY GKKQGRQLLG  1320
ICNHCQCFYS ESSNHCRSCH ETRRISDLYF SEHESRCKEN ISISWCSSSP LRIRLLKMLL  1380
TVIEASIPVE AFQPSWTDFQ RKTWGSRLLS SSSAEELLQI LTLLENVIKR DVMRSNYETT  1440
YELLACINPP GNSICRSSPE TVPVLSWIPL TTAAVALRLL EFDASLSYIL QQKAESHDHG  1500
SRDIKHLSNY VAVKNNQDSE TAVISNEYVK ESNWIDCGVG LSRTNHRRSD CKGGHGRTRG  1560
GKSQKRSSGS RAVSGKRSTG TNRQILRQVL MWKDGQVDET GGSRCGRRSI RNRQKSASKI  1620
KFGSEGGGHP EETIHEKLEL SLDNNQEWNN DQDLEQIDGS PSSSDRLLSI DDNGGVEYDD  1680
MLVDVCARSR RSGYVLASRS YDMDEDKEDD LYDDGERGNV MDGGDLYVEQ YINGEYNEES  1740
NKDLEHNMVS DEEMQSASSD YSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein