PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135748.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

CO-like

Protein Properties

Length: 404aa MW: 44437.5 Da PI: 5.4751

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135748.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.9	7.3e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 +C+ + +++++ +C++++ lC +C + H+ H++ XP_022135748.1 4 ICDFCAHQRAIVYCRSDSAALCLSCDRNVHSAnalsrrHSR 44 7*****************************65677777766 PP
2	CCT	61.6	2.5e-21	347	390	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R a+lRYkeK+k RkFeKk+rY+sRK++A++R RvKGrFvk+ XP_022135748.1 347 RSDAVLRYKEKKKARKFEKKVRYASRKVRADTRRRVKGRFVKAG 390 889**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MGYICDFCAH QRAIVYCRSD SAALCLSCDR NVHSANALSR RHSRTLLCDR CHSQPAFVRC 60 PEENISLCQS CDYMGHSSSA SISSRKRQPI NCYSGCPTAA ELSSIWSFVL DLPSVSDACE 120 QELGLMSIAE NSAVNAWGPD DNAGQNDETT GLSSLDKSIW YGSSSVPQYL SKPQIMDQQM 180 TTDVTSPKLH CRGTQGPGFD IEDDLFENLN MDEDGLDIEN YDELFGVCRS YSEELLENGG 240 IDSLFRIKGI SAAKSGCPEG SSVGLVNNMM RPASSNAASA DSVMSSKTEP ILCYNNKQEH 300 SSLSFSGLTG ESSAGDHQDC GASSMLLMGE PPWCPMTTES SFQSSNRSDA VLRYKEKKKA 360 RKFEKKVRYA SRKVRADTRR RVKGRFVKAG EAYDYDPMSQ TRSY

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MGYICDFCAH QRAIVYCRSD SAALCLSCDR NVHSANALSR RHSRTLLCDR CHSQPAFVRC  60
PEENISLCQS CDYMGHSSSA SISSRKRQPI NCYSGCPTAA ELSSIWSFVL DLPSVSDACE  120
QELGLMSIAE NSAVNAWGPD DNAGQNDETT GLSSLDKSIW YGSSSVPQYL SKPQIMDQQM  180
TTDVTSPKLH CRGTQGPGFD IEDDLFENLN MDEDGLDIEN YDELFGVCRS YSEELLENGG  240
IDSLFRIKGI SAAKSGCPEG SSVGLVNNMM RPASSNAASA DSVMSSKTEP ILCYNNKQEH  300
SSLSFSGLTG ESSAGDHQDC GASSMLLMGE PPWCPMTTES SFQSSNRSDA VLRYKEKKKA  360
RKFEKKVRYA SRKVRADTRR RVKGRFVKAG EAYDYDPMSQ TRSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	1e-130	CO-like family protein