PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135715.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

DBB

Protein Properties

Length: 284aa MW: 30913.5 Da PI: 6.2298

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135715.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.5	2.6e-08	3	43	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +C+ +++ e+ fC ++ lC+ C l+ H+ H+ XP_022135715.1 3 IRCDVCDKAEAAVFCSADEAALCHGCDLQVHQAnklagkHS 43 58*****************************7666666665 PP
2	zf-B_box	28.8	2.5e-09	54	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 e ++C+ ++e ++ fC++++ lC++C ++H+ Ht XP_022135715.1 54 ESPICDICQERRALVFCQQDRAILCRECDISIHEAneHT 92 5789*****************************667775 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MKIRCDVCDK AEAAVFCSAD EAALCHGCDL QVHQANKLAG KHSRFSLLQP IVTESPICDI 60 CQERRALVFC QQDRAILCRE CDISIHEANE HTQKHSRFLL TGVKLSPTCF SYQTSSSSDG 120 CDAGMDVKTG SSHACSKRPK TATKEISSSH SAEKAAPSTS NYKAEDGQAS DGGSLSTSSI 180 SEYLETLPGW CVEEFLDPSA AAANRFCKFN SEIVAFENQN LEDQHESLGT TRFGNTLEFS 240 GKISQTRSWN GVGISRKTCR REKMGVGDQI ISSFGSESET ILVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	1e-59	DBB family protein