PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135705.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 510aa MW: 54426.4 Da PI: 7.9078

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.6	8.4e-31	262	320	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_022135705.1 262 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHNHP 320 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MDTAPPPPTL QFPVNLNSSP PPPPPPVNFF AADDKTRVAK VPTSDNNLTP SNLAHFNINT 60 GLNLLTTNSS SDQSMVDDGA SPNPEDKRSK NERVVLQAEL ERINTENQRL KEMLNQVTSN 120 YHALQMHFTT LIQTQKSDAG DQLIDEKGGG GGGSGGGGGK LVPRQFMDLG LATNTETDEP 180 SMSSSDGDRR SRSPGNTGEV ASSSSKRHSP DQGSNWGSNN NNNKVPKFSS SSSPGKDVDQ 240 TEATMRKARV SVRARSEAPM ITDGCQWRKY GQKMAKGNPC PRAYYRCTMA AGCPVRKQVQ 300 RCAEDKTILI TTYEGNHNHP LPPAAMAMAS TTSSAARMLL SGSMSSAEGL MNSNFLARTL 360 LPCSSSMATI SASAPFPTVT LDLTQSPNSL PFQRPPAGQF QIPFLTPTHN LMPQIFGQPL 420 YHNQSKFSGL QMSKEIEGSQ VAQPPQNPFA ETLSAAGAAI AADPNFIAAL ATAMTSIIGG 480 SHHQHQKETS NGTSNNSNNV DNNATSNSHS

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MDTAPPPPTL QFPVNLNSSP PPPPPPVNFF AADDKTRVAK VPTSDNNLTP SNLAHFNINT  60
GLNLLTTNSS SDQSMVDDGA SPNPEDKRSK NERVVLQAEL ERINTENQRL KEMLNQVTSN  120
YHALQMHFTT LIQTQKSDAG DQLIDEKGGG GGGSGGGGGK LVPRQFMDLG LATNTETDEP  180
SMSSSDGDRR SRSPGNTGEV ASSSSKRHSP DQGSNWGSNN NNNKVPKFSS SSSPGKDVDQ  240
TEATMRKARV SVRARSEAPM ITDGCQWRKY GQKMAKGNPC PRAYYRCTMA AGCPVRKQVQ  300
RCAEDKTILI TTYEGNHNHP LPPAAMAMAS TTSSAARMLL SGSMSSAEGL MNSNFLARTL  360
LPCSSSMATI SASAPFPTVT LDLTQSPNSL PFQRPPAGQF QIPFLTPTHN LMPQIFGQPL  420
YHNQSKFSGL QMSKEIEGSQ VAQPPQNPFA ETLSAAGAAI AADPNFIAAL ATAMTSIIGG  480
SHHQHQKETS NGTSNNSNNV DNNATSNSHS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	160	KGGGGGGSGGGGGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-103	WRKY family protein