PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022135411.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | MYB | ||||||||
Protein Properties | Length: 249aa MW: 28386.5 Da PI: 5.1979 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.1 | 6.3e-16 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed ll++ + +G g+W++ a + g++Rt+k+c++rw++yl XP_022135411.1 24 RGPWTADEDSLLIRSISVHGEGRWNLLAIRSGLRRTGKSCRLRWLNYL 71 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.5 | 1.8e-14 | 77 | 120 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++ E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_022135411.1 77 RGSLSPHEQLLILDLHCRWGNR-WSKIAQELP-GRTDNEIKNYWRT 120 78889*****************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MAKSQTSSCS SSTVVEDDQI GLRRGPWTAD EDSLLIRSIS VHGEGRWNLL AIRSGLRRTG 60 KSCRLRWLNY LKPDVKRGSL SPHEQLLILD LHCRWGNRWS KIAQELPGRT DNEIKNYWRT 120 RVQRQAKLLN IDTNSPEFKD IINRFWIPRL VQQIHEESSN SSPPSSSSSS SPQLSDSDEK 180 RPRFVTAEED EKVTGSDPLL FSDVVPSWNH GGGGDMGDFD YPIGEFTSWM EEDDSDCGGL 240 WNFEGLWQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25340.1 | 3e-67 | MYB family protein |