PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135382.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

AP2

Protein Properties

Length: 354aa MW: 40533.7 Da PI: 7.9779

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135382.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.5	1.1e-15	45	104	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_022135382.1 45 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 104 57*****************999955656446***********************98 PP
2	AP2	47.1	5.7e-15	147	195	1	52
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkk 52 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ + XP_022135382.1 147 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDIAAIE 195 89**99******99966...3.6*******************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MAKSTSQHLQ ITDSTNNLNK ISIMKTKTKR TRRSVPRDSP PQRSSIYRGV TRHRWTGRYE 60 AHLWDKNCWN ESQNKKGRQV YLGAYDDEEA AAHAYDLAAL KYWGQETILN FPLTSYQKEV 120 KEMEGQSREE YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA 180 TQEEAATAYD IAAIEXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 240 XXXXXXXXXM AEPIALVPSH RSTTTTTSAL GLLLQSSKFK EMMETNSAAE FPSTPTSSSE 300 QIERRRCLFP DDVQTLFACD SSGSYCYGEA DDAMFSDFNS FVPPPLSQYD DLDD

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MAKSTSQHLQ ITDSTNNLNK ISIMKTKTKR TRRSVPRDSP PQRSSIYRGV TRHRWTGRYE  60
AHLWDKNCWN ESQNKKGRQV YLGAYDDEEA AAHAYDLAAL KYWGQETILN FPLTSYQKEV  120
KEMEGQSREE YIGSLRRKSS GFSRGVSKYR GVARHHHNGR WEARIGRVFG NKYLYLGTYA  180
TQEEAATAYD IAAIEXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  240
XXXXXXXXXM AEPIALVPSH RSTTTTTSAL GLLLQSSKFK EMMETNSAAE FPSTPTSSSE  300
QIERRRCLFP DDVQTLFACD SSGSYCYGEA DDAMFSDFNS FVPPPLSQYD DLDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	3e-82	AP2 family protein