PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135375.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

SBP

Protein Properties

Length: 550aa MW: 60105 Da PI: 7.8252

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.5	3.3e-42	175	251	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cqv gC++dls+ k+yh+rhkvCevhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q+ XP_022135375.1 175 CQVYGCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQM 251 **************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MESWSYVSEG KGCMSDEINS PTSSLARNKD SLLGWEFKNP CNFGGAMLAT GQQVDNHGFG 60 ELVFPEMSGK QLPDNSVCDI LSSKVAGGRF LNPTMNSSNA FLGEDESTSK LSGSIVDSSS 120 RDSSFIDLKL GRFADQRDAH GYKFLKGAPI LSSSESSMPS KRVRASGLNS QTYFCQVYGC 180 NKDLSSSKDY HKRHKVCEVH SKTAKVIVNG IEQRFCQQCS RFHLLAEFDD GKRSCRKRLA 240 GHNERRRKPQ MAINSGRAGR FLQSYNGSRL QGTTLTATSF ICQEILPNGL LHPEKYGTND 300 WCRNVKIEDK NEYMPLSAVH VPSGHLPSKS LFSPYDIETQ IPPFHDNGPN AATGNMFKEN 360 SNQYPVSVGG VNSSARSFFN NTSLGSEYFS VYSAASTDRI SGLSDSGCAL SLLSSQTQNS 420 STHSSGIPIA RPLVLLDGQN HYNMNQLSEK LMGVSSQVSV SGVSNKFNSS GLNASEGFTL 480 GPILTPETSD AVNFEITNRI FHGSNLADPS EGSPTIDLLQ LSSQLQRVEH QRQAMQVKQE 540 SNAFCCLRIT

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MESWSYVSEG KGCMSDEINS PTSSLARNKD SLLGWEFKNP CNFGGAMLAT GQQVDNHGFG  60
ELVFPEMSGK QLPDNSVCDI LSSKVAGGRF LNPTMNSSNA FLGEDESTSK LSGSIVDSSS  120
RDSSFIDLKL GRFADQRDAH GYKFLKGAPI LSSSESSMPS KRVRASGLNS QTYFCQVYGC  180
NKDLSSSKDY HKRHKVCEVH SKTAKVIVNG IEQRFCQQCS RFHLLAEFDD GKRSCRKRLA  240
GHNERRRKPQ MAINSGRAGR FLQSYNGSRL QGTTLTATSF ICQEILPNGL LHPEKYGTND  300
WCRNVKIEDK NEYMPLSAVH VPSGHLPSKS LFSPYDIETQ IPPFHDNGPN AATGNMFKEN  360
SNQYPVSVGG VNSSARSFFN NTSLGSEYFS VYSAASTDRI SGLSDSGCAL SLLSSQTQNS  420
STHSSGIPIA RPLVLLDGQN HYNMNQLSEK LMGVSSQVSV SGVSNKFNSS GLNASEGFTL  480
GPILTPETSD AVNFEITNRI FHGSNLADPS EGSPTIDLLQ LSSQLQRVEH QRQAMQVKQE  540
SNAFCCLRIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	3e-48	SBP family protein