PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135322.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family NAC
Protein Properties Length: 323aa    MW: 36723.9 Da    PI: 9.0265
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.82.5e-5451301128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+++yL++k++++ ++  ++i+ vd++k ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++ 
  XP_022135322.1   5 LPPGFRFHPTDEELISYYLTQKLSDSAFTS-KAIAVVDLNKNEPWDLPAKASMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFR- 97 
                     79*************************999.88***************999999****************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +  lvg+kktLvfykgrap+gekt+Wvmheyr 
  XP_022135322.1  98 GPVLVGMKKTLVFYKGRAPRGEKTNWVMHEYRR 130
                     99*****************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEESLPPGFR FHPTDEELIS YYLTQKLSDS AFTSKAIAVV DLNKNEPWDL PAKASMGEKE  60
WYFFSLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIFRGPV LVGMKKTLVF YKGRAPRGEK  120
TNWVMHEYRR ENKHLFKPSS KEEWAVCRVF QKQNTPKKPH QTASSQPSLS SPCDTNSIVN  180
EFGDNNIELS NFNNIPINNN SQSANNFSNN IMNMNMNNWG APSSNETLCP SLSWPASSLL  240
TSNLSMNSLL LKALQLRSFQ QQRDVFASSS SSYNNNIPQA NVFNSQFGTD HLSFQVSSSS  300
SKVFESSPQQ QQQEQPLNLD SLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.17e-97NAC family protein