PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135145.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

bHLH

Protein Properties

Length: 560aa MW: 61305 Da PI: 8.4557

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	53.6	4e-17	257	306	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr l+P++ ++K +Ka+ L ++veYI+ Lq XP_022135145.1 257 RSKHSATEQRRRSKINDRFQMLRGLIPHS----DQKRDKASFLLEVVEYIQFLQ 306 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MELPQPRQFG AEGSKSTHDF LSLYSHSSPQ LDPRPSPQGG YLKTHNFLQP QERIRKGSTK 60 EETDVERPPP PAPPPSSVEH LLPGGIGTYS ISHVSYFDHQ RVLPKPEGSV FTGARSSSST 120 ERNDENSNGS SFAAAGCGFT LWEECAAKKG KTGKENLVAN EPRASTSQWT ASMERPSQSS 180 SNNHHNTFSC HSSSQPTGKK NQSFMEMLKS AKSTSQDEEL DDDGDFVVKK ETSTANKGEL 240 RIKVDGQSSD PKANTPRSKH SATEQRRRSK INDRFQMLRG LIPHSDQKRD KASFLLEVVE 300 YIQFLQEKVQ KYEGSYQEWN HEMAKLMPLR NNQRSADGYN DQSRGINSGS GPALVFAAKL 360 VEKNAPVSPI VPGSSHNAVD SDTSSATTLK AVDHHSGRTY NAVPSPMSMP PKLYAPTRDG 420 NVVPQPPNQL SSDPEHPSSR PQILSCQARC FNSDVAVASE MQKEQDLTIE GGTINISSVY 480 SQGLLNTLTH ALQSSGVDLS QARISVQIEL GKRATRTVIA PTSIVKDVDI PINDMGTIHS 540 RVSGTEDSER ARKKLKTVKS

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MELPQPRQFG AEGSKSTHDF LSLYSHSSPQ LDPRPSPQGG YLKTHNFLQP QERIRKGSTK  60
EETDVERPPP PAPPPSSVEH LLPGGIGTYS ISHVSYFDHQ RVLPKPEGSV FTGARSSSST  120
ERNDENSNGS SFAAAGCGFT LWEECAAKKG KTGKENLVAN EPRASTSQWT ASMERPSQSS  180
SNNHHNTFSC HSSSQPTGKK NQSFMEMLKS AKSTSQDEEL DDDGDFVVKK ETSTANKGEL  240
RIKVDGQSSD PKANTPRSKH SATEQRRRSK INDRFQMLRG LIPHSDQKRD KASFLLEVVE  300
YIQFLQEKVQ KYEGSYQEWN HEMAKLMPLR NNQRSADGYN DQSRGINSGS GPALVFAAKL  360
VEKNAPVSPI VPGSSHNAVD SDTSSATTLK AVDHHSGRTY NAVPSPMSMP PKLYAPTRDG  420
NVVPQPPNQL SSDPEHPSSR PQILSCQARC FNSDVAVASE MQKEQDLTIE GGTINISSVY  480
SQGLLNTLTH ALQSSGVDLS QARISVQIEL GKRATRTVIA PTSIVKDVDI PINDMGTIHS  540
RVSGTEDSER ARKKLKTVKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-113	bHLH family protein