PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022135144.1
Organism
Momordica charantia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
Family MYB_related
Protein Properties Length: 314aa    MW: 34345.2 Da    PI: 6.8915
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022135144.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.71.3e-13102146347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_022135144.1 102 PWTEEEHKLFLIGLQRVGKGDWRGISRNFVKTRTPTQVASHAQKY 146
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MRSSTAVTNE SAAAETGGGC PGEIMLFGVR VVVDSMRKSV SLNNLSQYEQ PHEAANVIAN  60
ENKNDVVSVN NKDDVAAGYA SADDAVPNAR GNRERERKRG VPWTEEEHKL FLIGLQRVGK  120
GDWRGISRNF VKTRTPTQVA SHAQKYFLRR SNLNRRRRRS SLFDITTDTV TAEPMVEEPV  180
QHQEISSQSH SFTPSALPEI SQNNVIPMVQ TLPLTIGPTP LATPTKNLME KCGPGEVNTE  240
NDGSLRLGLT DSIFSSNQTP NSTDLNLNSN SIMEPSALSL RLSLTSDHRE ASSRHSTFQA  300
MPSFNNGEGI ISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.23e-63MYB_related family protein