PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022135102.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 508aa MW: 55075 Da PI: 6.5746

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022135102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	77.4	1.6e-24	197	253	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+ + +rsYY+Ct+++C++kk +e++++ ++v+ei+Y+++H h+ XP_022135102.1 197 SDGYNWRKYGQKQVKSPKGSRSYYKCTYSECCAKK-IECCDHSGHVTEIVYKSQHSHD 253 7******************************98.*******************7 PP
2	WRKY	98	6.2e-31	371	427	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e + e+p++v+itY+g H+h+ XP_022135102.1 371 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVENPNAVIITYKGIHDHD 427 9*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 508 aa Download sequence
MAEREGCETD QLGSSKATGG QEDDEEEEME DSEDESEVEL EDGEGRVSES QSAELRAVSS 60 VNGTAASGSR PETLAAPSAI QSSENGRSDG FLVNSATQSL QGAELKPVLS SCNEPLAVEA 120 VQTDQVQEQG ATCKGPGSDQ SPTSVTQSIS SSASPSLSEH KLSPKKVHKE CQPEPSQKNS 180 SDRRTVSPVV NVRTPASDGY NWRKYGQKQV KSPKGSRSYY KCTYSECCAK KIECCDHSGH 240 VTEIVYKSQH SHDPPRKINN PKESKLVPYV EPVVKKIIAE HSRRIISDSD PPTPSKEPLR 300 ETAIVLERKR QYSNDSDGNE EFKVKDENVN EPETKLKVKK SSAGYSGSPL KPGKKPKFVV 360 HAAGDVGISG DGYRWRKYGQ KMVKGNPHPR NYYRCTSAGC PVRKHIESAV ENPNAVIITY 420 KGIHDHDTPV PKKRHGPPSA PLVAAAAPAS MNNMQPKKTD AVQSQISSTQ WSVDAEGELT 480 GEALDLGGEK AMESARTLLS IGFEIKPC

Sequence ? help Back to Top

Protein Sequence Length: 508 aa Download sequence

MAEREGCETD QLGSSKATGG QEDDEEEEME DSEDESEVEL EDGEGRVSES QSAELRAVSS  60
VNGTAASGSR PETLAAPSAI QSSENGRSDG FLVNSATQSL QGAELKPVLS SCNEPLAVEA  120
VQTDQVQEQG ATCKGPGSDQ SPTSVTQSIS SSASPSLSEH KLSPKKVHKE CQPEPSQKNS  180
SDRRTVSPVV NVRTPASDGY NWRKYGQKQV KSPKGSRSYY KCTYSECCAK KIECCDHSGH  240
VTEIVYKSQH SHDPPRKINN PKESKLVPYV EPVVKKIIAE HSRRIISDSD PPTPSKEPLR  300
ETAIVLERKR QYSNDSDGNE EFKVKDENVN EPETKLKVKK SSAGYSGSPL KPGKKPKFVV  360
HAAGDVGISG DGYRWRKYGQ KMVKGNPHPR NYYRCTSAGC PVRKHIESAV ENPNAVIITY  420
KGIHDHDTPV PKKRHGPPSA PLVAAAAPAS MNNMQPKKTD AVQSQISSTQ WSVDAEGELT  480
GEALDLGGEK AMESARTLLS IGFEIKPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-118	WRKY family protein