PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134968.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 338aa MW: 38175.6 Da PI: 6.3483

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134968.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.6e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl XP_022134968.1 14 KGPWSPEEDAKLKAYIEEHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	39.8	1e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ ++ G++ W+ Ia+ ++ gRt++++k++w++ XP_022134968.1 69 GGFSEEEDNIICNLYISIGSR-WSVIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE EHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC NLYISIGSRW SVIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 RKQSSSNNYN TGLSPSSSSS EDPKEALSNS ALERLQLHMQ LQGLQNPLSF YTHHQLWPKL 180 HPIQEKFIQT LQSLNHQNPN FLNPNLQDTQ LLLPGQAVPK AAAADFFQPQ SNTISVSLPQ 240 DYEIPSSDQT SGEHHEVPNF AQVDDFLNEK AEGNFMAQPE QMAEFDCFKE VGGSKDGLVW 300 WSQNEHDLRP ASSSNSWDSS SVLQSELMFQ DYELGYNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	2e-90	MYB family protein