PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134909.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

Trihelix

Protein Properties

Length: 907aa MW: 100333 Da PI: 8.9011

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134909.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	63.3	5.6e-20	815	895	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e+++Li++r e++ r++ ++ +++lWee+s m+ g++rsp qCk+ w +l +++++ k +k+r +++pyf+++ XP_022134909.1 815 KWKPEEIKKLIKLRGELNVRFQVARGRMALWEEISTSMSTDGINRSPGQCKSLWASLIQKFEESKGEKKSR-----KSWPYFEEMS 895 7***********************************************************999988885.....56****95 PP

Sequence ? help Back to Top
Protein Sequence Length: 907 aa Download sequence
MQLELLGGSS VLSSPHSAPY RQRMAAFGAL SLCPCSPLSR PYHTVRTIYC CNGSPTVIGK 60 NVSKVPRKRL GRLEGARKSM EDSVQRKMEQ FYEGSDGPPL RVLPIGGLGE IGMNCMLVGN 120 YDRYILIDAG VMFPDHDELG VQKIIPDTTF IKRWSHKIEA VVITHGHEDH IGALPWVIPA 180 LDSHTPIYAS SFTVELIKKR LKENGIFVPS RLKVFKTKRR FTAGPFEIEP IRVTHSIPDC 240 CGLVLRCADG TILHTGDWKI DESPLDGKVF DRQTLEQLSK EGVTLMMSDS TNVLSPGRTI 300 SESVVADALL RRISVAKGRV ITTQFASNIH RLGSVKAAAD LTGRKLVFVG MSLRTYLDAA 360 WKDGKAPIDP STLVKVEDID AYAPKDLLIV TTGSQAEPRA ALNLASYGSS HSLKLSKEDV 420 ILYSAKVIPG NESRVMKMLN RISEIGSNII MGKNEGLHTS GHGYRGELEE VLQIVKPQHF 480 LPIHGELLFL KEHELLGRST GIRHTTVIKN GEMLGVSHLR NRRVLSNGFT SLGKENLQLK 540 YSDGDKAFGS SSELFVDERL KIATDGIIVV SMEILRPHSV DGLIETGIKG KLRITTRCLW 600 LDKGKLLDAL HKAAHAALSS CPVNCPLAHL ERTVSEVLRK MVRKYSGKRP EVIVMALESP 660 GGVLSEELDT RLSGKPIAGI GMSALRKAVD GQPTKSHLNK IRPNGNDDLH SVDNSSHESQ 720 GNYIEPVRLL PEEDYSSSNS NLAEIQSFDN EGLEDFWRPF IMPSSVSELV KENEGSVQQS 780 NNTLEITNEG EGQDDKSLKM SNSDMKPLKP MKRNKWKPEE IKKLIKLRGE LNVRFQVARG 840 RMALWEEIST SMSTDGINRS PGQCKSLWAS LIQKFEESKG EKKSRKSWPY FEEMSGILSD 900 SEALASK

Sequence ? help Back to Top

Protein Sequence Length: 907 aa Download sequence

MQLELLGGSS VLSSPHSAPY RQRMAAFGAL SLCPCSPLSR PYHTVRTIYC CNGSPTVIGK  60
NVSKVPRKRL GRLEGARKSM EDSVQRKMEQ FYEGSDGPPL RVLPIGGLGE IGMNCMLVGN  120
YDRYILIDAG VMFPDHDELG VQKIIPDTTF IKRWSHKIEA VVITHGHEDH IGALPWVIPA  180
LDSHTPIYAS SFTVELIKKR LKENGIFVPS RLKVFKTKRR FTAGPFEIEP IRVTHSIPDC  240
CGLVLRCADG TILHTGDWKI DESPLDGKVF DRQTLEQLSK EGVTLMMSDS TNVLSPGRTI  300
SESVVADALL RRISVAKGRV ITTQFASNIH RLGSVKAAAD LTGRKLVFVG MSLRTYLDAA  360
WKDGKAPIDP STLVKVEDID AYAPKDLLIV TTGSQAEPRA ALNLASYGSS HSLKLSKEDV  420
ILYSAKVIPG NESRVMKMLN RISEIGSNII MGKNEGLHTS GHGYRGELEE VLQIVKPQHF  480
LPIHGELLFL KEHELLGRST GIRHTTVIKN GEMLGVSHLR NRRVLSNGFT SLGKENLQLK  540
YSDGDKAFGS SSELFVDERL KIATDGIIVV SMEILRPHSV DGLIETGIKG KLRITTRCLW  600
LDKGKLLDAL HKAAHAALSS CPVNCPLAHL ERTVSEVLRK MVRKYSGKRP EVIVMALESP  660
GGVLSEELDT RLSGKPIAGI GMSALRKAVD GQPTKSHLNK IRPNGNDDLH SVDNSSHESQ  720
GNYIEPVRLL PEEDYSSSNS NLAEIQSFDN EGLEDFWRPF IMPSSVSELV KENEGSVQQS  780
NNTLEITNEG EGQDDKSLKM SNSDMKPLKP MKRNKWKPEE IKKLIKLRGE LNVRFQVARG  840
RMALWEEIST SMSTDGINRS PGQCKSLWAS LIQKFEESKG EKKSRKSWPY FEEMSGILSD  900
SEALASK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein