PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022134908.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | Trihelix | ||||||||
Protein Properties | Length: 908aa MW: 100461 Da PI: 8.9011 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 66.4 | 5.8e-21 | 815 | 896 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e+++Li++r e++ r++ ++ +++lWee+s m+ g++rsp qCk+ w +l ++++++ +gekk ++++pyf+++ XP_022134908.1 815 KWKPEEIKKLIKLRGELNVRFQVARGRMALWEEISTSMSTDGINRSPGQCKSLWASLIQKFEQESKGEKKS----RKSWPYFEEMS 896 7********************************************************************93....556******95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 908 aa Download sequence |
MQLELLGGSS VLSSPHSAPY RQRMAAFGAL SLCPCSPLSR PYHTVRTIYC CNGSPTVIGK 60 NVSKVPRKRL GRLEGARKSM EDSVQRKMEQ FYEGSDGPPL RVLPIGGLGE IGMNCMLVGN 120 YDRYILIDAG VMFPDHDELG VQKIIPDTTF IKRWSHKIEA VVITHGHEDH IGALPWVIPA 180 LDSHTPIYAS SFTVELIKKR LKENGIFVPS RLKVFKTKRR FTAGPFEIEP IRVTHSIPDC 240 CGLVLRCADG TILHTGDWKI DESPLDGKVF DRQTLEQLSK EGVTLMMSDS TNVLSPGRTI 300 SESVVADALL RRISVAKGRV ITTQFASNIH RLGSVKAAAD LTGRKLVFVG MSLRTYLDAA 360 WKDGKAPIDP STLVKVEDID AYAPKDLLIV TTGSQAEPRA ALNLASYGSS HSLKLSKEDV 420 ILYSAKVIPG NESRVMKMLN RISEIGSNII MGKNEGLHTS GHGYRGELEE VLQIVKPQHF 480 LPIHGELLFL KEHELLGRST GIRHTTVIKN GEMLGVSHLR NRRVLSNGFT SLGKENLQLK 540 YSDGDKAFGS SSELFVDERL KIATDGIIVV SMEILRPHSV DGLIETGIKG KLRITTRCLW 600 LDKGKLLDAL HKAAHAALSS CPVNCPLAHL ERTVSEVLRK MVRKYSGKRP EVIVMALESP 660 GGVLSEELDT RLSGKPIAGI GMSALRKAVD GQPTKSHLNK IRPNGNDDLH SVDNSSHESQ 720 GNYIEPVRLL PEEDYSSSNS NLAEIQSFDN EGLEDFWRPF IMPSSVSELV KENEGSVQQS 780 NNTLEITNEG EGQDDKSLKM SNSDMKPLKP MKRNKWKPEE IKKLIKLRGE LNVRFQVARG 840 RMALWEEIST SMSTDGINRS PGQCKSLWAS LIQKFEQESK GEKKSRKSWP YFEEMSGILS 900 DSEALASK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63420.1 | 0.0 | Trihelix family protein |