PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134679.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

ARR-B

Protein Properties

Length: 667aa MW: 72714.6 Da PI: 6.57

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.9	5.2e-29	211	264	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl XP_022134679.1 211 KPRVVWSVELHRKFVSAVNQL-GLEKAVPKKILDLMNVEGLTRENVASHLQKYRL 264 79*****************.******************************8 PP
2	Myb_DNA-binding	40.3	7.2e-13	213	263	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m+ +g+t++++ s++qky+ XP_022134679.1 213 RVVWSVELHRKFVSAVNQLGLEkaVPKKILDLMNvEGLTRENVASHLQKYR 263 678***********************************************7 PP
3	Response_reg	81.3	3.2e-27	26	134	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ +++l+++l++ +y +v++++++ eal++l+e++ +Dl++ D++mp+mdG++ll+ e ++lp+i+++ah++ e++ + + G XP_022134679.1 26 VLAVDDDPICLKVLESLLRRCRY-HVTTTKQSIEALRMLRENRnkFDLVISDVNMPDMDGFKLLECVGLE-MDLPVIMLSAHSDTELVMKGITHG 118 799******************.***********999889****************99664.48****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_022134679.1 119 ACDYLLKPVRIEELKN 134 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 667 aa Download sequence
MTVEGHSVAS AGEDGAADRF PVGMRVLAVD DDPICLKVLE SLLRRCRYHV TTTKQSIEAL 60 RMLRENRNKF DLVISDVNMP DMDGFKLLEC VGLEMDLPVI MLSAHSDTEL VMKGITHGAC 120 DYLLKPVRIE ELKNIWQHVI RRKKLEPKAK NKFPNQDKAR NGGGEGEQGF SSTSNAENAK 180 FNRKRKDQDE DDDEEGKENG HDSDDPSNQK KPRVVWSVEL HRKFVSAVNQ LGLEKAVPKK 240 ILDLMNVEGL TRENVASHLQ KYRLYLKRIS NVASQQANMV ATFGSKDGTY MRIGSLDGYA 300 DLHGFAGSGR LPNSTLSSYS PAGILGRLNS PAGMSLRGIA SSGLIQQSSQ NLNCAINTLG 360 KIQPSTMLPP SQTTSLMQGT PMSLELSQLE HSKSSAPIGE FNTMNETSGF GVPNSFSDTR 420 VNIGNSTNSV SRSPLMLQGT MAAYGNQTSL RVDPSNGETF DIETSGSNFL DPDLPNENWQ 480 GAAQLSRFSA TSLTPNEAYN NDQLHAINST ISSTPSTIGS IPVDFSTRSA VSAPLQDSRN 540 MQCQAGLGSV IQAMNSMPKQ SWEEHRYDYS QNVQHNLSAI NSMVPSNGTL MSQSLNQNNI 600 GCDRKVSSSL IVPPNAAALH SVLEKLGPNA RVDADGNYVL NQTKSHGASI QGSFESLDDI 660 MNAMIKR

Sequence ? help Back to Top

Protein Sequence Length: 667 aa Download sequence

MTVEGHSVAS AGEDGAADRF PVGMRVLAVD DDPICLKVLE SLLRRCRYHV TTTKQSIEAL  60
RMLRENRNKF DLVISDVNMP DMDGFKLLEC VGLEMDLPVI MLSAHSDTEL VMKGITHGAC  120
DYLLKPVRIE ELKNIWQHVI RRKKLEPKAK NKFPNQDKAR NGGGEGEQGF SSTSNAENAK  180
FNRKRKDQDE DDDEEGKENG HDSDDPSNQK KPRVVWSVEL HRKFVSAVNQ LGLEKAVPKK  240
ILDLMNVEGL TRENVASHLQ KYRLYLKRIS NVASQQANMV ATFGSKDGTY MRIGSLDGYA  300
DLHGFAGSGR LPNSTLSSYS PAGILGRLNS PAGMSLRGIA SSGLIQQSSQ NLNCAINTLG  360
KIQPSTMLPP SQTTSLMQGT PMSLELSQLE HSKSSAPIGE FNTMNETSGF GVPNSFSDTR  420
VNIGNSTNSV SRSPLMLQGT MAAYGNQTSL RVDPSNGETF DIETSGSNFL DPDLPNENWQ  480
GAAQLSRFSA TSLTPNEAYN NDQLHAINST ISSTPSTIGS IPVDFSTRSA VSAPLQDSRN  540
MQCQAGLGSV IQAMNSMPKQ SWEEHRYDYS QNVQHNLSAI NSMVPSNGTL MSQSLNQNNI  600
GCDRKVSSSL IVPPNAAALH SVLEKLGPNA RVDADGNYVL NQTKSHGASI QGSFESLDDI  660
MNAMIKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-131	ARR-B family protein