PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022134328.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 240aa MW: 27320.7 Da PI: 7.0867 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54 | 3.9e-17 | 7 | 54 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++v+ +G g+W+++a g++R +k+c++rw +yl XP_022134328.1 7 KGPWTPEEDRLLSQYVEVHGEGRWTSVAIGSGLNRNGKSCRLRWVNYL 54 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.2 | 2.9e-16 | 64 | 104 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ XP_022134328.1 64 SPQEEAIIIELHALWGNR-WSTIARYLP-GRTDNEIKNYWRTH 104 89****************.*********.************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 240 aa Download sequence |
MEQGWTKGPW TPEEDRLLSQ YVEVHGEGRW TSVAIGSGLN RNGKSCRLRW VNYLRPGLKR 60 CHLSPQEEAI IIELHALWGN RWSTIARYLP GRTDNEIKNY WRTHFKKPKL EKKLEMKKTI 120 TTATSQKQPK RKAHNNNKTA QTTSKYEEKL SDEQNQMMMK PCGREDSAVV FADPDAMADH 180 QCFLYEDFTS WAAVAAATAE DVLWSGVWDA ADQSDQVLGG SSLCLGEDDS NIFCNGGFFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G30210.1 | 2e-61 | MYB family protein |