PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022134164.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

WRKY

Protein Properties

Length: 506aa MW: 55372.4 Da PI: 8.6354

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022134164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	108.7	2.8e-34	233	289	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK vkgsefprsYY+Ct+ +Cpvkkk+ers d++++ei+Y+g+Hnhe XP_022134164.1 233 DDGYNWRKYGQKLVKGSEFPRSYYKCTHLNCPVKKKIERSP-DGQITEIIYKGQHNHE 289 8**************************************.*************8 PP
2	WRKY	106.1	1.8e-33	392	450	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+vers++d k+v++tYeg+Hnh+ XP_022134164.1 392 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCNVRKHVERSSTDSKAVVTTYEGKHNHD 450 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MAKKEDSARA PLQRPTITLP PRPSMEAFFS GGPTGVSPGP MTLVSSFFAD GAVDSPSFSQ 60 LLAGAMGSPM AMGFLGSGST PNYYAKDGGA SEMEFGLNKH TKPLNLVVAR SPLFTVPPGL 120 SPSGLLNSPG FFPPQSPFGX SHQQALAQVT AQAALAHSHM HMQQAEYQHS SVPAPTESLR 180 RDPSFTLDEP SQQSILPSTS DTKSFIAEST EVSHSDRKYQ PPPPSHASDK PADDGYNWRK 240 YGQKLVKGSE FPRSYYKCTH LNCPVKKKIE RSPDGQITEI IYKGQHNHEP PPANKRARDN 300 SEPTGCTNSS MKLEYGSQNQ AGNFNKSSEN VQLGSSDSEE QADTEVTDDR GEDEPNPKRQ 360 NIDAGTSAVA LSHKTLTEPK IIVQTRSEVD LLDDGYRWRK YGQKVVKGNP NPRSYYKCTS 420 AGCNVRKHVE RSSTDSKAVV TTYEGKHNHD VPAARNSSHH TVNNTVPQIK PHKVVAQKHP 480 LLKEREFGTN DQRPAVLRLK EEQITV

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MAKKEDSARA PLQRPTITLP PRPSMEAFFS GGPTGVSPGP MTLVSSFFAD GAVDSPSFSQ  60
LLAGAMGSPM AMGFLGSGST PNYYAKDGGA SEMEFGLNKH TKPLNLVVAR SPLFTVPPGL  120
SPSGLLNSPG FFPPQSPFGX SHQQALAQVT AQAALAHSHM HMQQAEYQHS SVPAPTESLR  180
RDPSFTLDEP SQQSILPSTS DTKSFIAEST EVSHSDRKYQ PPPPSHASDK PADDGYNWRK  240
YGQKLVKGSE FPRSYYKCTH LNCPVKKKIE RSPDGQITEI IYKGQHNHEP PPANKRARDN  300
SEPTGCTNSS MKLEYGSQNQ AGNFNKSSEN VQLGSSDSEE QADTEVTDDR GEDEPNPKRQ  360
NIDAGTSAVA LSHKTLTEPK IIVQTRSEVD LLDDGYRWRK YGQKVVKGNP NPRSYYKCTS  420
AGCNVRKHVE RSSTDSKAVV TTYEGKHNHD VPAARNSSHH TVNNTVPQIK PHKVVAQKHP  480
LLKEREFGTN DQRPAVLRLK EEQITV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-129	WRKY family protein