PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133916.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB

Protein Properties

Length: 270aa MW: 30564.4 Da PI: 8.0828

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.3e-08	59	101	4	44
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 WT +d+l+ +a + + +W ++a +++ g+++ ++++++ XP_022133916.1 59 WTRSDDKLFEEALVVVPADlpdRWQRVADHVP-GKSPTEVRDHY 101 ***************99*********.********9 PP
2	Myb_DNA-binding	44.1	4.8e-14	157	201	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + k++G+g+W++I+r + +Rt+ q+ s+ qky XP_022133916.1 157 PWTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKY 201 8***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence
MLYIPQPRIF QFLHPPTKHH MRNLQTNPSS SISLSLFLLV LVMFQDSRWP NMTQSLTHWT 60 RSDDKLFEEA LVVVPADLPD RWQRVADHVP GKSPTEVRDH YEALVHDVLE IDSGRVELPS 120 YADESAVGLP EWDSSGQISF GSKAKHGGDN ERKKGTPWTE EEHRLFLLGL KKFGKGDWRS 180 ISRNVVITRT PTQVASHAQK YFLRQNSGKK ERKRSSIHDI TTVDNSSIPI PVDPNWISPA 240 PNSSMQQLSS TGHSQDQGGS LGYQNFGFPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	1e-69	MYB family protein