PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022133839.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

MYB_related

Protein Properties

Length: 1239aa MW: 135471 Da PI: 8.0118

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022133839.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28	5e-09	802	842	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E l+++av+ +G++ ++ I+ ++g +++ qck ++ XP_022133839.1 802 YWTDGEKSLFIEAVRAYGKN-FSMISTHVG-TKSTDQCKIFFS 842 5***************99.*****.******8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 1239 aa Download sequence
MIRGTNQRRD REYSVSSSGW KPLKWTRGGG LSSRTSTSGH SSSTKSIDAL DSNETKSETV 60 LKNESQNLSP SADPAECAMS SMPCDETTVR KKPRLGWGEG LAKYEKKKVE VPDGTAFTNV 120 NAESTHSLNS SLIEKGPRGS GFSDCTSPAT PSSVVCGSSP GGDEKSSGKA ASDNDVSNMH 180 GSPGSGFQNQ CEEPSFNLEK LDNFSIDDLG SPLIQLLQSN DSISVDPGIM SCTAMSKLLI 240 YKNEISKVLE TTESEIDLLE NELKRLRSES KGSFSFPLAS SSLMTGDKNF EEHSDFSNMI 300 PPAATLPVVT SENNISKKTL LSTSDSEEVH TDVNEKAVGR FGRSDAMESV ITGEKLTISG 360 CSVRDNVVPS VDNSILIKRE AVTLEPISSD INESDDGGDS LFNLILASNK ESACRASEAL 420 ISMLPANEHK IDIWSTNVSC SQNQCLMRER YAKKKRLLRF KERVITLKYR AYQSLWKESL 480 HVPPVRKLRA KSQKKYQLSL WTNYSGYQKN RSSIRVRIPS SAGNPNPVSN TAILRHVSKQ 540 LSNSLVKQYR RTLKMPALVL DQKGKMASRF VSNNGLVEDP CAVEKERMMI NPWTSEEKDV 600 FMEKLACFGK DFGKIATFLD HKTTADCIEF YYKNHKSDCF EKTKKLEFGK KAKSSTSTYL 660 VTTGKKWNPE TNAASLELLG AASAMTACAH KYSSSRSSGR TAYHTTQCDD GLSERAKSFH 720 MFGNEREKVA ADVLAGICGS LSSEAMGSCI TSNFDRRDGS QDLKCKKGAT TVLRRRMTAN 780 IPRFIDDEIF SDESCGEMDP SYWTDGEKSL FIEAVRAYGK NFSMISTHVG TKSTDQCKIF 840 FSKARKCLGL DLICTAKKMP PDSDDKAKGH ECDANGGCHE AGSRMVEDLP KFVTSINGGE 900 AESMNRQSAH QEVKESNPSS KICPSNIAGN AVVSDACNKK DSSDSAFDDN CQSMNSANDK 960 KDLVRNQHHA VVSMAADEIA KEQGASAPTT TSVGFGNAAI DNYGVPNLKV FSTSKVSDPG 1020 TKEQLERGNV DTSKDRREKV DSHAVDSSST PINSRVNSLP KHGQGYHHVR VHSRSLSDSE 1080 PSSRNGDVRL FGQILSHPSS SPNSKSGTSE NGNHRTQLHK FKRRLKVGSH GNLSAAKFNQ 1140 EDAPSRSYGI WDGNRLRTGL SSLPDPTNLL SSYPTFNHYS RSASSPISKE QKSNGYSQMS 1200 EVSSGKEAVG GIMVGENCNE DDECNNAEQR VVVAHRREI

Sequence ? help Back to Top

Protein Sequence Length: 1239 aa Download sequence

MIRGTNQRRD REYSVSSSGW KPLKWTRGGG LSSRTSTSGH SSSTKSIDAL DSNETKSETV  60
LKNESQNLSP SADPAECAMS SMPCDETTVR KKPRLGWGEG LAKYEKKKVE VPDGTAFTNV  120
NAESTHSLNS SLIEKGPRGS GFSDCTSPAT PSSVVCGSSP GGDEKSSGKA ASDNDVSNMH  180
GSPGSGFQNQ CEEPSFNLEK LDNFSIDDLG SPLIQLLQSN DSISVDPGIM SCTAMSKLLI  240
YKNEISKVLE TTESEIDLLE NELKRLRSES KGSFSFPLAS SSLMTGDKNF EEHSDFSNMI  300
PPAATLPVVT SENNISKKTL LSTSDSEEVH TDVNEKAVGR FGRSDAMESV ITGEKLTISG  360
CSVRDNVVPS VDNSILIKRE AVTLEPISSD INESDDGGDS LFNLILASNK ESACRASEAL  420
ISMLPANEHK IDIWSTNVSC SQNQCLMRER YAKKKRLLRF KERVITLKYR AYQSLWKESL  480
HVPPVRKLRA KSQKKYQLSL WTNYSGYQKN RSSIRVRIPS SAGNPNPVSN TAILRHVSKQ  540
LSNSLVKQYR RTLKMPALVL DQKGKMASRF VSNNGLVEDP CAVEKERMMI NPWTSEEKDV  600
FMEKLACFGK DFGKIATFLD HKTTADCIEF YYKNHKSDCF EKTKKLEFGK KAKSSTSTYL  660
VTTGKKWNPE TNAASLELLG AASAMTACAH KYSSSRSSGR TAYHTTQCDD GLSERAKSFH  720
MFGNEREKVA ADVLAGICGS LSSEAMGSCI TSNFDRRDGS QDLKCKKGAT TVLRRRMTAN  780
IPRFIDDEIF SDESCGEMDP SYWTDGEKSL FIEAVRAYGK NFSMISTHVG TKSTDQCKIF  840
FSKARKCLGL DLICTAKKMP PDSDDKAKGH ECDANGGCHE AGSRMVEDLP KFVTSINGGE  900
AESMNRQSAH QEVKESNPSS KICPSNIAGN AVVSDACNKK DSSDSAFDDN CQSMNSANDK  960
KDLVRNQHHA VVSMAADEIA KEQGASAPTT TSVGFGNAAI DNYGVPNLKV FSTSKVSDPG  1020
TKEQLERGNV DTSKDRREKV DSHAVDSSST PINSRVNSLP KHGQGYHHVR VHSRSLSDSE  1080
PSSRNGDVRL FGQILSHPSS SPNSKSGTSE NGNHRTQLHK FKRRLKVGSH GNLSAAKFNQ  1140
EDAPSRSYGI WDGNRLRTGL SSLPDPTNLL SSYPTFNHYS RSASSPISKE QKSNGYSQMS  1200
EVSSGKEAVG GIMVGENCNE DDECNNAEQR VVVAHRREI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-129	MYB family protein